Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04429 and PFR28_04430 are separated by 30 nucleotidesPFR28_04430 and PFR28_04431 are separated by 187 nucleotidesPFR28_04431 and PFR28_04432 are separated by 6 nucleotidesPFR28_04432 and PFR28_04433 overlap by 4 nucleotides PFR28_04429: PFR28_04429 - hypothetical protein, at 5,041,985 to 5,043,733 _04429 PFR28_04430: PFR28_04430 - hypothetical protein, at 5,043,764 to 5,044,621 _04430 PFR28_04431: PFR28_04431 - Tol-Pal system protein TolQ, at 5,044,809 to 5,045,789 _04431 PFR28_04432: PFR28_04432 - Biopolymer transport protein ExbD, at 5,045,796 to 5,046,224 _04432 PFR28_04433: PFR28_04433 - hypothetical protein, at 5,046,221 to 5,046,976 _04433
Group Condition PFR28_04429 PFR28_04430 PFR28_04431 PFR28_04432 PFR28_04433
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 -0.2 N.D. N.D. N.D.
carbon source D-Glucuronic (C) 10 mM -0.0 -0.3 N.D. N.D. N.D.
carbon source L-pyroglutamic (C) 10 mM -0.1 -0.2 N.D. N.D. N.D.
carbon source Glycocyamine 20 mM (C) -0.1 -0.2 N.D. N.D. N.D.
carbon source L-Lysine (C) 10 mM -0.2 -0.1 N.D. N.D. N.D.
carbon source L-Phenylalanine 5 mM (C) +0.0 -0.3 N.D. N.D. N.D.
carbon source L-Phenylalanine 5 mM (C) +0.0 -0.3 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) 10 mM -0.3 +0.1 N.D. N.D. N.D.
carbon source Glycocyamine 10 mM (C) +0.1 -0.2 N.D. N.D. N.D.
carbon source D-Galactose (C) 10 mM +0.1 -0.2 N.D. N.D. N.D.
carbon source L-Phenylalanine 5 mM (C) +0.2 -0.3 N.D. N.D. N.D.
carbon source caffeic (C) -0.2 +0.1 N.D. N.D. N.D.
carbon source L-Lysine (C) 10 mM -0.2 +0.2 N.D. N.D. N.D.
carbon source Cytidine (C) -0.2 +0.1 N.D. N.D. N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.1 -0.2 N.D. N.D. N.D.
carbon source sn-glycero-3-phosphocholine (C) -0.1 +0.2 N.D. N.D. N.D.
carbon source acetate carbon 10 mM +0.2 -0.1 N.D. N.D. N.D.
carbon source Guanosine carbon 10 mM +0.2 -0.1 N.D. N.D. N.D.
carbon source p-Coumaric (C) -0.2 +0.3 N.D. N.D. N.D.
carbon source L-Phenylalanine carbon 5 mM +0.2 -0.1 N.D. N.D. N.D.
stress D-Glucose (C); with Chloride 400 mM -0.1 +0.2 N.D. N.D. N.D.
carbon source Cytidine (C) +0.0 +0.2 N.D. N.D. N.D.
carbon source D-(+)-Galactosamine (C) 10 mM +0.0 +0.3 N.D. N.D. N.D.
carbon source propionate (C) 20 mM +0.2 +0.1 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.0 +0.3 N.D. N.D. N.D.
carbon source L-Phenylalanine carbon 5 mM +0.2 +0.2 N.D. N.D. N.D.
carbon source 4-Aminobutyric (C) 10 mM +0.1 +0.2 N.D. N.D. N.D.
carbon source Inosine (C) +0.1 +0.3 N.D. N.D. N.D.
carbon source L-Hydroxyproline carbon 10 mM +0.3 +0.2 N.D. N.D. N.D.
carbon source butyrate (C) +0.1 +0.4 N.D. N.D. N.D.
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