Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_04394 and PFR28_04395 are separated by 140 nucleotidesPFR28_04395 and PFR28_04396 are separated by 172 nucleotidesPFR28_04396 and PFR28_04397 are separated by 125 nucleotidesPFR28_04397 and PFR28_04398 are separated by 97 nucleotides PFR28_04394: PFR28_04394 - butyrate:acetyl-CoA coenzyme A-transferase, at 5,007,841 to 5,009,763 _04394 PFR28_04395: PFR28_04395 - hypothetical protein, at 5,009,904 to 5,010,329 _04395 PFR28_04396: PFR28_04396 - HTH-type transcriptional regulator PuuR, at 5,010,502 to 5,011,050 _04396 PFR28_04397: PFR28_04397 - Alanine racemase, at 5,011,176 to 5,012,249 _04397 PFR28_04398: PFR28_04398 - 2-iminobutanoate/2-iminopropanoate deaminase, at 5,012,347 to 5,012,700 _04398
Group Condition PFR28_04394 PFR28_04395 PFR28_04396 PFR28_04397 PFR28_04398
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.5 N.D. -2.3 N.D. -1.2
carbon source p-Coumaric (C) 2.5 mM -0.1 N.D. -1.9 N.D. -1.0
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.1 N.D. -1.9 N.D. -0.8
carbon source caffeic (C) 2.5 mM -0.2 N.D. -1.7 N.D. -1.0
carbon source caffeic (C) 2.5 mM -0.1 N.D. -1.5 N.D. -1.1
carbon source methyl-trans-p-coumarate (C) -0.1 N.D. -2.3 N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 N.D. -1.3 N.D. -1.1
carbon source p-Coumaric (C) 2.5 mM -0.1 N.D. -1.6 N.D. -0.9
carbon source p-Coumaric (C) 2.5 mM -0.1 N.D. -1.4 N.D. -1.0
carbon source Adenosine (C) 10 mM +0.0 N.D. -1.8 N.D. -0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 N.D. -1.5 N.D. -1.2
carbon source caffeic (C) 2.5 mM -0.1 N.D. -1.3 N.D. -1.0
carbon source Guanosine (C) -0.0 N.D. -1.7 N.D. -0.2
carbon source Xanthosine (C) -0.1 N.D. -1.7 N.D. -0.2
carbon source L-Hydroxyproline carbon 10 mM +0.0 N.D. -1.2 N.D. -0.8
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 N.D. -1.0 N.D. -0.7
carbon source D(+)-Glucuronic carbon 10 mM -0.1 N.D. -1.3 N.D. -0.5
carbon source Shikimic Acid carbon 10 mM -0.1 N.D. -1.1 N.D. -0.6
carbon source methyl ferulate (C) -0.1 N.D. -1.3 N.D. -0.4
carbon source Shikimic Acid carbon 10 mM +0.2 N.D. -1.3 N.D. -0.7
carbon source Ferulic Acid (C) 2.5 mM -0.3 N.D. -0.6 N.D. -0.9
carbon source Ferulic Acid (C) 2.5 mM -0.0 N.D. -0.8 N.D. -0.9
carbon source methyl-trans-p-coumarate (C) -0.0 N.D. -1.3 N.D. -0.4
carbon source Adenosine (C) 10 mM -0.1 N.D. -1.3 N.D. -0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 N.D. -0.1 N.D. -1.4
carbon source sn-glycero-3-phosphocholine (C) +0.1 N.D. -1.2 N.D. +0.5
carbon source 5-Aminovaleric carbon 10 mM +0.1 N.D. +1.1 N.D. -0.6
carbon source L-Lysine (C) 10 mM -0.0 N.D. +3.3 N.D. -0.4
carbon source L-Lysine (C) 10 mM -0.1 N.D. +3.8 N.D. -0.3
carbon source L-Lysine (C) 10 mM -0.0 N.D. +4.1 N.D. -0.4
remove
PFR28_04394
plot		 remove
PFR28_04395
plot		 remove
PFR28_04396		 remove
PFR28_04397
plot		 remove
PFR28_04398
plot