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Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_04343 and PFR28_04344 are separated by 199 nucleotides
PFR28_04344 and PFR28_04345 are separated by 222 nucleotides
PFR28_04345 and PFR28_04346 are separated by 17 nucleotides
PFR28_04346 and PFR28_04347 are separated by 357 nucleotides
PFR28_04343: PFR28_04343 - Glutamine transport ATP-binding protein GlnQ, at 4,951,092 to 4,951,829
_04343
PFR28_04344: PFR28_04344 - Exopolyphosphatase, at 4,952,029 to 4,953,531
_04344
PFR28_04345: PFR28_04345 - Polyphosphate kinase, at 4,953,754 to 4,955,976
_04345
PFR28_04346: PFR28_04346 - Delta-aminolevulinic acid dehydratase, at 4,955,994 to 4,957,007
_04346
PFR28_04347: PFR28_04347 - hypothetical protein, at 4,957,365 to 4,957,988
_04347
Group
Condition
PFR28
_04343
PFR28
_04344
PFR28
_04345
PFR28
_04346
PFR28
_04347
carbon source
Shikimic Acid carbon 10 mM
-0.3
-0.6
-0.9
N.D.
-3.7
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-1.4
+0.4
-3.2
N.D.
-1.3
carbon source
5-Aminovaleric carbon 10 mM
-0.2
-0.2
-4.1
N.D.
-0.8
carbon source
Shikimic Acid carbon 10 mM
-0.0
-1.2
-0.8
N.D.
-3.3
carbon source
L-Leucine (C) 10 mM
+0.1
-0.9
-4.5
N.D.
+0.4
carbon source
5-Aminovaleric carbon 10 mM
-0.0
+0.0
-3.9
N.D.
-0.9
carbon source
D-Galacturonic Acid (C) 10 mM
+0.0
-0.9
-1.4
N.D.
-2.5
carbon source
Guanosine carbon 10 mM
-0.1
-0.7
-4.1
N.D.
+0.1
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-2.4
+0.4
-2.0
N.D.
-0.7
carbon source
5-Aminovaleric carbon 10 mM
+0.1
+0.2
-4.0
N.D.
-0.9
carbon source
Guanosine carbon 10 mM
-0.1
-0.5
-3.9
N.D.
+0.2
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-1.0
+0.3
-2.3
N.D.
-1.3
carbon source
Vanillic Acid (C) 2.5 mM
-1.3
+0.9
-3.8
N.D.
-0.0
carbon source
Shikimic Acid carbon 10 mM
+0.2
-0.8
-0.6
N.D.
-3.2
carbon source
Vanillic Acid (C) 2.5 mM
-1.7
+0.8
-3.3
N.D.
-0.1
carbon source
L-Lysine (C) 10 mM
-0.5
+0.4
-3.3
N.D.
-0.3
carbon source
L-Leucine (C) 10 mM
+0.0
+0.2
-4.4
N.D.
+0.5
carbon source
L-Leucine (C) 10 mM
+0.5
-0.1
-4.2
N.D.
+0.5
carbon source
Vanillic Acid (C) 2.5 mM
-1.3
+1.3
-3.3
N.D.
+0.1
carbon source
methyl-trans-p-coumarate (C)
+0.4
-1.8
-2.2
N.D.
+1.0
carbon source
Xanthosine (C) 10 mM
-0.5
+1.2
-3.6
N.D.
+0.6
carbon source
Xanthosine (C) 10 mM
+0.0
+0.8
-3.3
N.D.
+0.4
stress
D-Glucose (C); with Chloride 200 mM
-0.8
-2.6
+0.6
N.D.
+1.0
carbon source
Cytidine (C)
-2.0
+1.7
-2.4
N.D.
+0.9
carbon source
Cytidine carbon 10 mM
+0.8
+1.0
-2.6
N.D.
+0.3
carbon source
Cytidine (C)
+0.1
+1.5
-2.5
N.D.
+0.6
carbon source
Cytidine (C)
+0.1
+2.1
-2.1
N.D.
+0.6
carbon source
Inosine carbon 10 mM
+0.1
-1.6
+4.9
N.D.
-0.1
carbon source
Inosine carbon 10 mM
-0.2
-0.7
+4.9
N.D.
-0.4
carbon source
Inosine carbon 10 mM
+0.2
-1.2
+4.9
N.D.
-0.3
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PFR28_04345
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PFR28_04347
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