Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_04316 and PFR28_04317 are separated by 334 nucleotidesPFR28_04317 and PFR28_04318 are separated by 214 nucleotidesPFR28_04318 and PFR28_04319 are separated by 113 nucleotidesPFR28_04319 and PFR28_04320 are separated by 74 nucleotides PFR28_04316: PFR28_04316 - Aminomethyltransferase, at 4,923,199 to 4,924,281 _04316 PFR28_04317: PFR28_04317 - hypothetical protein, at 4,924,616 to 4,926,223 _04317 PFR28_04318: PFR28_04318 - putative binding protein component of ABC iron transporter, at 4,926,438 to 4,927,442 _04318 PFR28_04319: PFR28_04319 - 2-octaprenylphenol hydroxylase, at 4,927,556 to 4,928,779 _04319 PFR28_04320: PFR28_04320 - 2-octaprenyl-6-methoxyphenol hydroxylase, at 4,928,854 to 4,930,053 _04320
Group Condition PFR28_04316 PFR28_04317 PFR28_04318 PFR28_04319 PFR28_04320
carbon source methyl-trans-p-coumarate (C) -1.9 -0.0 +0.2 N.D. N.D.
carbon source methyl-trans-p-coumarate (C) -1.5 -0.1 -0.1 N.D. N.D.
carbon source methyl-trans-p-coumarate (C) -1.6 -0.0 +0.1 N.D. N.D.
carbon source propionate (C) 20 mM -1.1 -0.1 -0.3 N.D. N.D.
carbon source L-Phenylalanine 5 mM (C) -0.0 -0.7 -0.7 N.D. N.D.
carbon source L-Phenylalanine 5 mM (C) +0.0 -0.8 -0.6 N.D. N.D.
carbon source Vanillic Acid (C) 2.5 mM -1.2 -0.0 -0.1 N.D. N.D.
carbon source L-Phenylalanine 5 mM (C) +0.1 -0.6 -0.7 N.D. N.D.
carbon source Vanillic Acid (C) 2.5 mM -1.2 -0.0 +0.0 N.D. N.D.
carbon source methyl ferulate (C) -0.9 -0.2 -0.1 N.D. N.D.
carbon source methyl ferulate (C) -1.1 -0.2 +0.0 N.D. N.D.
carbon source L-Leucine (C) 10 mM -1.7 +0.4 +0.2 N.D. N.D.
carbon source Inosine (C) -0.5 -0.2 -0.3 N.D. N.D.
carbon source propionate (C) 20 mM -0.8 -0.0 -0.2 N.D. N.D.
carbon source Vanillic Acid (C) 2.5 mM -0.9 +0.0 -0.1 N.D. N.D.
carbon source L-Lysine (C) 10 mM -0.8 +0.1 +0.0 N.D. N.D.
carbon source L-Leucine (C) 10 mM -1.5 +0.5 +0.3 N.D. N.D.
carbon source L-Leucine (C) 10 mM -1.3 +0.3 +0.3 N.D. N.D.
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.9 +0.2 +0.1 N.D. N.D.
carbon source D-Fructose (C) 10 mM +0.2 -0.4 -0.4 N.D. N.D.
carbon source NAG carbon 10 mM +0.3 -0.5 -0.3 N.D. N.D.
carbon source NAG carbon 10 mM +0.3 -0.4 -0.4 N.D. N.D.
carbon source L-Hydroxyproline (C) 10 mM -0.7 +0.2 +0.1 N.D. N.D.
carbon source L-Lysine (C) 10 mM -0.6 +0.1 +0.1 N.D. N.D.
carbon source L-Hydroxyproline (C) 10 mM -0.6 +0.2 -0.0 N.D. N.D.
carbon source D-Fructose carbon 10 mM +0.3 -0.3 -0.2 N.D. N.D.
carbon source L-Hydroxyproline (C) 10 mM -0.5 +0.2 +0.2 N.D. N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM +0.4 -0.3 -0.2 N.D. N.D.
carbon source L-Phenylalanine carbon 5 mM +0.5 -0.2 -0.2 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 +0.3 +0.6 N.D. N.D.
remove
PFR28_04316
plot		 remove
PFR28_04317
plot		 remove
PFR28_04318		 remove
PFR28_04319
plot		 remove
PFR28_04320
plot