Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_04302 and PFR28_04303 are separated by 7 nucleotidesPFR28_04303 and PFR28_04304 are separated by 25 nucleotidesPFR28_04304 and PFR28_04305 are separated by 91 nucleotidesPFR28_04305 and PFR28_04306 are separated by 299 nucleotides PFR28_04302: PFR28_04302 - Putative aliphatic sulfonates transport permease protein SsuC, at 4,908,522 to 4,909,304 _04302 PFR28_04303: PFR28_04303 - Alkanesulfonate monooxygenase, at 4,909,312 to 4,910,460 _04303 PFR28_04304: PFR28_04304 - Putative aliphatic sulfonates-binding protein, at 4,910,486 to 4,911,451 _04304 PFR28_04305: PFR28_04305 - FMN reductase (NADPH), at 4,911,543 to 4,912,136 _04305 PFR28_04306: PFR28_04306 - Peroxiredoxin, at 4,912,436 to 4,913,074 _04306
Group Condition PFR28_04302 PFR28_04303 PFR28_04304 PFR28_04305 PFR28_04306
carbon source Guanosine (C) -0.1 -0.2 +0.1 -1.7 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.2 -0.2 -0.6 -0.3
carbon source L-Phenylalanine carbon 5 mM -0.1 -0.1 -0.3 -0.5 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.2 -0.1 +0.1 -0.9 -0.3
carbon source octanoate (C) +0.2 +0.0 -0.2 -0.6 -0.4
carbon source Guanosine (C) +0.0 -0.2 -0.7 +0.2 -0.1
carbon source Cytidine (C) +0.3 +0.0 -0.4 -0.4 -0.1
carbon source propionate (C) 20 mM +0.1 +0.2 -0.1 -0.6 -0.1
carbon source L-Carnitine 10 mM (C) +0.1 -0.3 +0.0 -0.6 +0.1
carbon source butyrate (C) 10 mM -0.1 +0.1 -0.2 -0.5 +0.1
stress D-Glucose (C); with Chloride 200 mM +0.1 -0.1 +0.1 -0.6 +0.1
carbon source butyrate (C) 10 mM +0.2 -0.2 -0.2 -0.4 +0.3
carbon source Quinic Acid (C) +0.2 -0.4 -0.2 +0.1 +0.1
carbon source sn-glycero-3-phosphocholine (C) +0.2 +0.2 -0.1 -0.7 +0.2
stress D-Glucose (C); with Chloride 400 mM -0.1 +0.1 -0.1 -0.4 +0.3
carbon source Vanillic Acid (C) 2.5 mM -0.2 -0.4 +0.1 +0.6 -0.3
carbon source L-Hydroxyproline (C) 10 mM -0.2 +0.3 -0.4 +0.0 +0.1
carbon source D-Ribose (C) 10 mM +0.2 +0.2 -0.2 -0.3 +0.1
carbon source Shikimic Acid (C) 10 mM -0.1 +0.4 -0.1 +0.2 -0.2
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 -0.2 +0.1 +0.6 -0.2
carbon source Adenosine (C) 10 mM +0.0 -0.4 -0.0 +0.6 +0.1
carbon source L-Lactate (C) 10 mM -0.0 -0.8 +0.7 +0.1 +0.4
carbon source Glycocyamine 10 mM (C) +0.2 +0.3 -0.0 -0.4 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 -0.2 -0.2 +0.4 +0.4
carbon source Xanthosine (C) +0.0 +0.4 +0.1 -0.2 +0.3
carbon source Inosine carbon 10 mM -0.1 +0.1 +0.2 +0.5 -0.2
carbon source butyrate (C) +0.1 +0.1 -0.2 +0.2 +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.2 +0.0 +0.4 -0.1
carbon source D-Ribose carbon 10 mM +0.2 +0.3 +0.2 +0.4 +0.1
carbon source Betaine (C) +0.5 +0.4 -0.3 +0.4 +0.1
remove
PFR28_04302
plot		 remove
PFR28_04303
plot		 remove
PFR28_04304		 remove
PFR28_04305
plot		 remove
PFR28_04306
plot