Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_04280 and PFR28_04281 are separated by 115 nucleotidesPFR28_04281 and PFR28_04282 are separated by 84 nucleotidesPFR28_04282 and PFR28_04283 overlap by 8 nucleotidesPFR28_04283 and PFR28_04284 are separated by 193 nucleotides PFR28_04280: PFR28_04280 - L-cystine uptake protein TcyP, at 4,884,042 to 4,885,433 _04280 PFR28_04281: PFR28_04281 - IS1595 family transposase ISSsu9, at 4,885,549 to 4,886,061 _04281 PFR28_04282: PFR28_04282 - putative membrane protein, at 4,886,146 to 4,887,525 _04282 PFR28_04283: PFR28_04283 - hypothetical protein, at 4,887,518 to 4,888,891 _04283 PFR28_04284: PFR28_04284 - hypothetical protein, at 4,889,085 to 4,889,576 _04284
Group Condition PFR28_04280 PFR28_04281 PFR28_04282 PFR28_04283 PFR28_04284
stress D-Glucose (C); with Chloride 400 mM -0.1 N.D. -0.9 -0.4 -0.3
carbon source sn-glycero-3-phosphocholine (C) +0.0 N.D. -0.3 -0.2 -0.9
carbon source Guanosine (C) -0.1 N.D. -0.7 -0.4 -0.0
carbon source Cytidine (C) +0.1 N.D. -0.8 +0.1 -0.3
carbon source Adenosine (C) 10 mM +0.2 N.D. -0.6 -0.1 -0.3
carbon source L-Lactate (C) 10 mM +0.3 N.D. -0.8 -0.3 -0.0
carbon source L-Lactate (C) 10 mM +0.0 N.D. -1.2 -0.0 +0.4
carbon source Glycocyamine 20 mM (C) +0.1 N.D. -0.7 +0.2 -0.3
carbon source trans-aconitic (C) 5 mM +0.2 N.D. -0.8 -0.2 +0.1
carbon source D-Xylose (C) 10 mM +0.1 N.D. -0.5 +0.3 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 N.D. -0.5 +0.7 -0.6
carbon source D-Trehalose (C) 5 mM -0.1 N.D. -0.7 +0.2 +0.2
carbon source Xanthosine (C) +0.1 N.D. -0.9 +0.2 +0.3
carbon source D-(+)-Galactosamine (C) 10 mM -0.0 N.D. -0.6 -0.1 +0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 N.D. -0.6 +0.1 +0.5
carbon source butyrate (C) -0.2 N.D. +0.5 -0.3 -0.2
carbon source Cytidine (C) +0.1 N.D. +0.6 -0.4 -0.2
carbon source L-Leucine (C) 10 mM +0.1 N.D. -0.4 -0.2 +0.7
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 N.D. -0.7 +0.3 +0.4
carbon source Guanosine (C) +0.1 N.D. +1.2 -0.3 -0.7
carbon source D-Ribose carbon 10 mM -0.0 N.D. +0.8 +0.1 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.4 N.D. +0.6 -0.0 +0.3
carbon source butyrate (C) 10 mM -0.1 N.D. +0.9 -0.2 -0.0
carbon source butyrate (C) +0.2 N.D. +0.7 -0.1 -0.3
carbon source Inosine (C) +0.1 N.D. +0.8 -0.1 -0.1
carbon source L-Leucine (C) 10 mM -0.1 N.D. +0.8 -0.1 +0.4
carbon source L-Valine (C) 10 mM +0.2 N.D. -0.2 +0.1 +0.8
carbon source p-Coumaric (C) +0.0 N.D. +0.6 -0.3 +0.7
carbon source L-Proline carbon 10 mM -0.0 N.D. +0.8 +0.1 +0.3
carbon source Guanosine (C) +0.3 N.D. +1.4 +0.1 -0.3
remove
PFR28_04280
plot		 remove
PFR28_04281
plot		 remove
PFR28_04282		 remove
PFR28_04283
plot		 remove
PFR28_04284
plot