Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04277 and PFR28_04278 are separated by 266 nucleotidesPFR28_04278 and PFR28_04279 are separated by 132 nucleotidesPFR28_04279 and PFR28_04280 are separated by 379 nucleotidesPFR28_04280 and PFR28_04281 are separated by 115 nucleotides PFR28_04277: PFR28_04277 - Inner membrane transport protein YdhC, at 4,879,161 to 4,880,366 _04277 PFR28_04278: PFR28_04278 - Dihydroxy-acid dehydratase, at 4,880,633 to 4,882,474 _04278 PFR28_04279: PFR28_04279 - hypothetical protein, at 4,882,607 to 4,883,662 _04279 PFR28_04280: PFR28_04280 - L-cystine uptake protein TcyP, at 4,884,042 to 4,885,433 _04280 PFR28_04281: PFR28_04281 - IS1595 family transposase ISSsu9, at 4,885,549 to 4,886,061 _04281
Group Condition PFR28_04277 PFR28_04278 PFR28_04279 PFR28_04280 PFR28_04281
carbon source NAG carbon 10 mM +0.1 -6.4 +0.1 -0.1 N.D.
carbon source Shikimic Acid carbon 10 mM -0.0 -6.1 +0.0 +0.0 N.D.
carbon source D,L-Malic Acid (C) 10 mM +0.2 -5.9 -0.2 -0.0 N.D.
carbon source L-Hydroxyproline carbon 10 mM +0.0 -6.0 +0.1 +0.1 N.D.
carbon source 4-Guanidinobutyric (C) 10 mM +0.0 -6.0 +0.1 +0.1 N.D.
carbon source D-(+)-Galactosamine (C) 10 mM -0.0 -5.6 +0.0 -0.2 N.D.
carbon source L-Leucine (C) 10 mM -0.0 -5.8 +0.0 +0.1 N.D.
carbon source NAG carbon 10 mM -0.3 -5.6 +0.1 +0.1 N.D.
carbon source L-Valine (C) 10 mM -0.2 -5.6 +0.1 -0.0 N.D.
carbon source L-Proline carbon 10 mM +0.1 -5.9 +0.2 +0.1 N.D.
carbon source L-Valine (C) 10 mM +0.1 -5.8 +0.1 +0.0 N.D.
carbon source 5-Aminovaleric carbon 10 mM +0.3 -5.8 -0.1 +0.1 N.D.
carbon source gluconate carbon 10 mM +0.2 -5.6 +0.0 +0.0 N.D.
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.1 -5.6 +0.1 +0.1 N.D.
carbon source propionate carbon 20 mM -0.0 -5.5 +0.1 +0.1 N.D.
carbon source D-Fructose carbon 10 mM +0.1 -5.5 +0.0 +0.1 N.D.
carbon source 4-Aminobutyric carbon 10 mM -0.0 -5.4 +0.1 -0.0 N.D.
carbon source Fumarate (C) 20 mM -0.0 -5.5 +0.0 +0.1 N.D.
carbon source 4-Guanidinobutyric (C) 10 mM -0.1 -5.4 +0.1 +0.1 N.D.
carbon source D,L-Lactate carbon 20 mM -0.0 -5.4 +0.1 +0.1 N.D.
carbon source NAG carbon 10 mM +0.3 -5.5 +0.1 -0.1 N.D.
carbon source L-Arginine (C) 10 mM -0.3 -5.2 +0.2 +0.1 N.D.
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.2 -5.3 +0.1 -0.0 N.D.
carbon source Glycerol carbon 20 mM +0.1 -5.3 +0.1 +0.1 N.D.
carbon source trans-aconitic (C) 5 mM -0.1 -5.1 +0.1 +0.2 N.D.
carbon source Quinic Acid (C) 10 mM +0.1 -5.4 +0.2 +0.2 N.D.
carbon source D-Galactose carbon 10 mM +0.2 -5.1 +0.1 +0.1 N.D.
carbon source L-Lactate (C) 10 mM +0.2 -5.0 +0.3 +0.0 N.D.
carbon source L-Lactate (C) 10 mM +0.2 -4.9 +0.2 +0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 -4.8 +0.3 -0.0 N.D.
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