Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04247 and PFR28_04248 overlap by 4 nucleotidesPFR28_04248 and PFR28_04249 overlap by 4 nucleotidesPFR28_04249 and PFR28_04250 are separated by 18 nucleotidesPFR28_04250 and PFR28_04251 are separated by 139 nucleotides PFR28_04247: PFR28_04247 - hypothetical protein, at 4,851,733 to 4,852,167 _04247 PFR28_04248: PFR28_04248 - dITP/XTP pyrophosphatase, at 4,852,164 to 4,852,760 _04248 PFR28_04249: PFR28_04249 - Heme chaperone HemW, at 4,852,757 to 4,853,956 _04249 PFR28_04250: PFR28_04250 - hypothetical protein, at 4,853,975 to 4,854,298 _04250 PFR28_04251: PFR28_04251 - tRNA (guanine-N(7)-)-methyltransferase, at 4,854,438 to 4,855,163 _04251
Group Condition PFR28_04247 PFR28_04248 PFR28_04249 PFR28_04250 PFR28_04251
carbon source methyl ferulate (C) -0.4 -0.1 -0.3 +0.1 -1.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.7 -0.2 -0.5 -0.1 -0.3
carbon source L-Lactate (C) -0.3 -0.5 -0.4 +0.1 -0.5
carbon source p-Coumaric (C) 2.5 mM -0.6 -0.1 -0.5 -0.1 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.2 -0.2 -0.2 -0.0 -0.9
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 -0.2 -0.4 +0.1 -0.9
carbon source Betaine (C) 2.5 mM -0.3 -0.5 -0.3 +0.0 -0.4
carbon source Azelaic carbon 10 mM -0.2 -0.1 -0.1 +0.1 -1.0
carbon source methyl-trans-p-coumarate (C) -0.3 -0.5 -0.8 +0.0 +0.3
carbon source propionate (C) 20 mM -0.3 -0.7 -0.2 +0.1 -0.0
carbon source methyl ferulate (C) -0.5 +0.1 -0.6 +0.2 -0.5
carbon source methyl-trans-p-coumarate (C) +0.0 -0.6 -0.9 +0.1 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.3 -0.2 +0.2 -0.2 -0.5
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.3 -0.4 -0.3 -0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.3 -0.8 +0.2 +0.1 -0.2
carbon source methyl ferulate (C) -0.2 +0.3 -0.5 -0.2 -0.4
carbon source L-Lysine (C) 10 mM +0.1 -0.2 -1.0 +0.4 -0.1
carbon source Vanillic Acid (C) 2.5 mM -0.5 -0.1 -0.3 -0.2 +0.3
carbon source D-(+)-Galactosamine (C) 10 mM -0.0 -0.5 +0.4 -0.2 -0.2
carbon source Xanthosine (C) -0.5 +0.2 -0.1 +0.2 -0.4
carbon source methyl-trans-p-coumarate (C) -0.4 +0.2 -0.6 +0.1 +0.2
carbon source Vanillic Acid (C) 2.5 mM -0.5 -0.1 -0.4 -0.0 +0.7
carbon source propionate carbon 20 mM -0.2 -0.2 -0.5 +0.2 +0.5
carbon source Betaine (C) +0.1 +0.2 -0.0 +0.4 -0.8
carbon source D-Trehalose (C) 5 mM +0.1 -0.3 +0.5 +0.1 -0.4
stress D-Glucose (C); with Chloride 200 mM -0.3 +0.5 -0.4 +0.1 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 -0.7 +0.2 +0.2 +0.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.1 -0.4 +0.3 -0.2 +0.5
carbon source butyrate (C) 10 mM +0.6 +0.4 -0.2 +0.2 -0.1
carbon source Inosine carbon 10 mM +0.2 +0.8 +0.1 +0.0 +0.4
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