Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04227 and PFR28_04228 are separated by 208 nucleotidesPFR28_04228 and PFR28_04229 are separated by 151 nucleotidesPFR28_04229 and PFR28_04230 are separated by 10 nucleotidesPFR28_04230 and PFR28_04231 are separated by 48 nucleotides PFR28_04227: PFR28_04227 - Sensor histidine kinase RcsC, at 4,829,128 to 4,835,031 _04227 PFR28_04228: PFR28_04228 - hypothetical protein, at 4,835,240 to 4,837,300 _04228 PFR28_04229: PFR28_04229 - hypothetical protein, at 4,837,452 to 4,837,991 _04229 PFR28_04230: PFR28_04230 - Response regulator PleD, at 4,838,002 to 4,838,367 _04230 PFR28_04231: PFR28_04231 - Transcriptional regulatory protein WalR, at 4,838,416 to 4,838,844 _04231
Group Condition PFR28_04227 PFR28_04228 PFR28_04229 PFR28_04230 PFR28_04231
carbon source L-Phenylalanine 5 mM (C) -0.4 -0.8 -0.4 -1.7 -0.2
carbon source caffeic (C) -0.2 -0.4 -0.6 -1.5 -0.5
carbon source L-Phenylalanine 5 mM (C) -0.5 -0.7 -0.2 -1.1 -0.5
carbon source L-Phenylalanine 5 mM (C) -0.4 -0.4 -0.5 -0.9 -0.6
carbon source caffeic (C) 2.5 mM -0.3 -0.9 -0.2 -0.8 -0.5
carbon source p-Coumaric (C) 2.5 mM -0.2 -0.8 -0.3 -0.7 -0.4
carbon source p-Coumaric (C) 2.5 mM -0.4 -0.7 -0.2 -0.8 -0.2
carbon source L-Valine (C) 10 mM -0.5 -0.5 -0.0 -1.0 -0.3
carbon source Ferulic Acid (C) 2.5 mM -0.2 -0.7 -0.4 -0.5 -0.3
carbon source L-Isoleucine (C) 10 mM -0.2 +0.2 -0.2 -1.5 -0.4
carbon source p-Coumaric (C) 2.5 mM -0.2 -0.8 -0.3 -0.5 -0.2
carbon source L-Arabinose (C) 10 mM -0.2 -0.2 -0.5 -0.9 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.1 -1.1 -0.7 +0.1
carbon source L-Isoleucine carbon 10 mM -0.3 +0.1 -0.5 -1.1 -0.1
carbon source D-Glucosamine Hydrochloride carbon 10 mM -0.2 -0.3 -0.3 -0.7 -0.3
carbon source L-Isoleucine carbon 10 mM -0.1 -0.3 -0.2 -0.9 -0.3
carbon source Ferulic Acid (C) 2.5 mM -0.1 -0.4 -0.3 -0.6 -0.4
carbon source caffeic (C) 2.5 mM -0.2 -0.9 -0.0 -0.6 -0.1
carbon source L-Valine (C) 10 mM -0.2 -0.2 -0.1 -1.1 -0.2
carbon source Trisodium citrate 10 mM (C) -0.1 -0.7 -0.1 -1.0 +0.2
carbon source D-(+)-Galactosamine (C) 10 mM -0.2 +0.2 -0.5 -0.9 -0.2
carbon source methyl ferulate (C) +0.0 -1.3 -0.2 -0.3 +0.3
carbon source L-Valine (C) 10 mM -0.3 +0.2 +0.0 -1.3 -0.0
carbon source methyl-trans-p-coumarate (C) +0.1 +0.3 -1.0 -0.8 +0.4
carbon source Vanillic Acid (C) 2.5 mM +0.1 -0.9 +0.0 -0.5 +0.3
carbon source methyl ferulate (C) -0.2 -0.5 +0.3 -0.8 +0.3
carbon source butyrate (C) 10 mM -0.2 +0.0 +0.0 -1.2 +0.5
carbon source Betaine (C) +0.5 -0.1 -0.5 +0.9 -1.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -1.2 +0.5 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.0 -1.0 -0.3 +1.1 +0.3
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