Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04180 and PFR28_04181 are separated by 251 nucleotidesPFR28_04181 and PFR28_04182 are separated by 649 nucleotidesPFR28_04182 and PFR28_04183 are separated by 54 nucleotidesPFR28_04183 and PFR28_04184 are separated by 272 nucleotides PFR28_04180: PFR28_04180 - Alginate lyase, at 4,781,717 to 4,782,385 _04180 PFR28_04181: PFR28_04181 - Alginate lyase, at 4,782,637 to 4,783,305 _04181 PFR28_04182: PFR28_04182 - hypothetical protein, at 4,783,955 to 4,784,224 _04182 PFR28_04183: PFR28_04183 - Fructose-bisphosphate aldolase, at 4,784,279 to 4,785,343 _04183 PFR28_04184: PFR28_04184 - hypothetical protein, at 4,785,616 to 4,785,948 _04184
Group Condition PFR28_04180 PFR28_04181 PFR28_04182 PFR28_04183 PFR28_04184
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 +0.0 -0.2 N.D. -0.9
carbon source L-Lactate (C) 10 mM -0.1 -0.2 -0.5 N.D. -0.5
carbon source Inosine carbon 10 mM -0.0 +0.0 +0.1 N.D. -1.2
carbon source butyrate (C) 10 mM +0.2 +0.2 -0.6 N.D. -1.0
carbon source D-Trehalose (C) 5 mM +0.0 +0.1 -1.0 N.D. -0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.4 -0.2 +0.2 N.D. -0.6
carbon source Guanosine (C) +0.1 +0.0 -0.2 N.D. -1.0
carbon source Betaine (C) 2.5 mM -0.3 +0.1 -0.8 N.D. +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.8 -0.3 +0.3 N.D. +0.2
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 -0.0 +0.4 N.D. -0.8
carbon source L-Glutamic (C) 10 mM -0.0 +0.2 +0.2 N.D. -0.8
carbon source Guanosine (C) +0.0 -0.1 +0.5 N.D. -0.8
carbon source gluconate (C) 10 mM -0.1 +0.1 +0.6 N.D. -0.6
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 -0.1 +0.5 N.D. -0.5
stress D-Glucose (C); with Chloride 200 mM +0.2 -0.1 +0.6 N.D. -0.5
carbon source acetate (C) 30 mM +0.2 +0.3 +0.2 N.D. -0.5
carbon source Cytidine (C) -0.3 -0.0 +0.9 N.D. -0.3
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 -0.1 -0.3 N.D. +0.7
carbon source L-Valine (C) 10 mM +0.3 +0.2 -0.5 N.D. +0.4
carbon source Glycerol (C) 20 mM +0.3 +0.1 +0.5 N.D. -0.4
carbon source propionate carbon 20 mM +0.2 +0.2 +0.6 N.D. -0.2
carbon source Glycerol (C) 20 mM +0.2 +0.2 +0.7 N.D. -0.3
carbon source Cytidine (C) -0.1 -0.1 +0.7 N.D. +0.3
carbon source Guanosine (C) +0.3 +0.1 -0.3 N.D. +0.8
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.1 +0.8 N.D. +0.3
carbon source methyl ferulate (C) +0.1 -0.1 +0.6 N.D. +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +1.2 +0.2 +0.4 N.D. -0.6
carbon source D-Glucuronic (C) 10 mM -0.0 +0.0 +0.9 N.D. +0.4
carbon source butyrate (C) 10 mM +0.4 +0.2 +0.4 N.D. +0.4
carbon source Inosine (C) +0.5 +0.1 +0.5 N.D. +0.5
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