Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04166 and PFR28_04167 are separated by 80 nucleotidesPFR28_04167 and PFR28_04168 are separated by 214 nucleotidesPFR28_04168 and PFR28_04169 are separated by 234 nucleotidesPFR28_04169 and PFR28_04170 overlap by 1 nucleotides PFR28_04166: PFR28_04166 - HTH-type transcriptional regulator BetI, at 4,762,800 to 4,763,405 _04166 PFR28_04167: PFR28_04167 - NAD/NADP-dependent betaine aldehyde dehydrogenase, at 4,763,486 to 4,764,958 _04167 PFR28_04168: PFR28_04168 - Oxygen-dependent choline dehydrogenase, at 4,765,173 to 4,766,876 _04168 PFR28_04169: PFR28_04169 - hypothetical protein, at 4,767,111 to 4,768,553 _04169 PFR28_04170: PFR28_04170 - hypothetical protein, at 4,768,553 to 4,769,890 _04170
Group Condition PFR28_04166 PFR28_04167 PFR28_04168 PFR28_04169 PFR28_04170
carbon source Choline (C) 10 mM -0.7 -5.0 -5.1 +0.0 -0.1
carbon source Choline (C) 10 mM -0.7 -4.0 -4.9 +0.1 +0.0
carbon source Choline chloride (C) -1.5 -3.2 -4.4 +0.3 -0.1
carbon source sn-glycero-3-phosphocholine (C) -2.3 -2.1 -3.9 +0.1 -0.1
carbon source Choline chloride (C) -0.9 -3.3 -4.3 +0.3 -0.1
carbon source sn-glycero-3-phosphocholine (C) -0.4 -3.4 -4.1 +0.1 -0.1
carbon source Choline chloride (C) -0.7 -3.1 -4.2 +0.1 +0.1
carbon source Choline (C) 10 mM -1.0 -3.5 -3.8 +0.4 +0.1
carbon source sn-glycero-3-phosphocholine (C) -0.4 -2.9 -4.0 +0.4 +0.0
carbon source sn-glycero-3-phosphocholine (C) 10 mM -0.6 -2.0 -3.7 +0.1 +0.1
carbon source sn-glycero-3-phosphocholine (C) 10 mM -0.7 -2.2 -3.4 +0.1 +0.0
carbon source sn-glycero-3-phosphocholine (C) 10 mM -0.6 -2.0 -2.4 +0.1 +0.2
carbon source butyrate (C) 10 mM -0.5 -1.1 -0.2 -0.3 -0.2
carbon source Vanillic Acid (C) 2.5 mM -0.8 -0.3 -0.4 +0.2 -0.4
carbon source methyl ferulate (C) -1.3 -0.5 -0.0 +0.3 -0.0
carbon source octanoate (C) -1.1 -0.4 -0.1 +0.2 +0.0
carbon source Vanillic Acid (C) 2.5 mM -1.0 +0.1 -0.4 +0.3 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.7 -0.4 -0.4 +0.0 +0.2
carbon source p-Coumaric (C) 2.5 mM -0.8 -0.4 -0.1 +0.2 -0.0
carbon source Cytidine (C) -1.1 -0.3 +0.1 +0.3 -0.1
carbon source propionate carbon 20 mM -0.3 -0.5 -0.5 +0.4 -0.0
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -1.2 +0.1 -0.1 +0.2 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -0.0 -0.5 +0.4 -0.5
carbon source propionate (C) 20 mM -0.8 -0.5 +0.1 +0.3 +0.1
carbon source Betaine (C) -0.2 -1.0 +0.2 +0.4 -0.0
carbon source propionate carbon 20 mM +0.1 -0.6 -0.6 +0.3 +0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.5 -0.0 +0.6 -0.4
carbon source methyl-trans-p-coumarate (C) -0.6 -0.3 +0.4 +0.3 +0.1
carbon source L-Carnitine (C) 10 mM +0.6 -0.3 -0.4 +0.3 -0.0
carbon source methyl-trans-p-coumarate (C) -0.0 -0.3 +0.3 +0.5 +0.4
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