Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04161 and PFR28_04162 are separated by 574 nucleotidesPFR28_04162 and PFR28_04163 are separated by 428 nucleotidesPFR28_04163 and PFR28_04164 are separated by 63 nucleotidesPFR28_04164 and PFR28_04165 overlap by 4 nucleotides PFR28_04161: PFR28_04161 - HTH-type transcriptional regulator CdhR, at 4,755,923 to 4,757,026 _04161 PFR28_04162: PFR28_04162 - L-serine dehydratase TdcG, at 4,757,601 to 4,758,977 _04162 PFR28_04163: PFR28_04163 - hypothetical protein, at 4,759,406 to 4,760,353 _04163 PFR28_04164: PFR28_04164 - Glycine betaine transport system permease protein OpuAB, at 4,760,417 to 4,761,262 _04164 PFR28_04165: PFR28_04165 - Vitamin B12 import ATP-binding protein BtuD, at 4,761,259 to 4,762,437 _04165
Group Condition PFR28_04161 PFR28_04162 PFR28_04163 PFR28_04164 PFR28_04165
carbon source Choline (C) 10 mM -5.3 -2.2 -4.8 -5.8 -5.0
carbon source Choline (C) 10 mM -4.6 -2.4 -4.9 -4.0 -5.1
carbon source sn-glycero-3-phosphocholine (C) -4.4 -1.1 -3.5 -4.4 -6.1
carbon source Choline chloride (C) -4.1 -2.1 -4.1 -4.7 -4.1
carbon source Choline chloride (C) -3.5 -2.0 -3.9 -4.5 -3.8
carbon source Choline (C) 10 mM -4.6 -1.5 -3.2 -4.0 -3.7
carbon source sn-glycero-3-phosphocholine (C) -3.2 -1.1 -4.4 -4.4 -3.8
carbon source Choline chloride (C) -3.3 -1.8 -3.7 -4.2 -3.8
carbon source sn-glycero-3-phosphocholine (C) 10 mM -3.7 -0.8 -2.9 -3.4 -4.6
carbon source Betaine (C) 2.5 mM -3.1 -1.7 -2.4 -3.2 -4.6
carbon source sn-glycero-3-phosphocholine (C) 10 mM -3.2 -0.7 -3.3 -3.2 -3.9
carbon source Betaine (C) 2.5 mM -3.6 -2.3 -1.7 -3.1 -3.2
carbon source Betaine (C) 2.5 mM -3.2 -2.6 -2.4 -2.6 -3.0
carbon source L-Carnitine (C) 10 mM -4.4 +0.0 -2.1 -4.1 -3.2
carbon source sn-glycero-3-phosphocholine (C) -3.8 -0.5 -2.6 -2.3 -4.0
carbon source L-Carnitine (C) 10 mM -3.7 -0.1 -1.9 -2.4 -2.8
carbon source L-Carnitine 10 mM (C) -2.3 -0.8 -2.4 -2.6 -2.6
carbon source sn-glycero-3-phosphocholine (C) 10 mM -2.5 -0.7 -2.1 -2.3 -2.2
carbon source L-Carnitine 10 mM (C) -2.0 -0.7 -2.1 -2.5 -2.2
carbon source L-Carnitine 10 mM (C) -2.2 -0.6 -1.8 -1.8 -2.5
carbon source L-Carnitine (C) -1.5 -0.6 -1.2 -2.0 -1.3
carbon source L-Carnitine (C) -1.3 -0.5 -1.3 -1.3 -1.5
carbon source L-Carnitine (C) -1.5 -0.5 -1.2 -1.2 -1.0
carbon source Betaine (C) -1.5 -1.0 -0.3 -0.9 -1.0
carbon source Vanillic Acid (C) 2.5 mM -1.1 -0.2 -0.0 +0.3 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.0 -0.8 +0.3 +0.5 -0.1
carbon source Vanillic Acid (C) 2.5 mM -1.2 -0.1 -0.1 +0.4 +0.2
carbon source Ferulic Acid (C) 2.5 mM -1.3 -0.2 +0.1 +0.2 +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.8 +0.4 +0.1 +0.5 -0.5
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.4 -0.5 +0.2 +0.4 +0.7
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