Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04132 and PFR28_04133 overlap by 4 nucleotidesPFR28_04133 and PFR28_04134 are separated by 15 nucleotidesPFR28_04134 and PFR28_04135 are separated by 21 nucleotidesPFR28_04135 and PFR28_04136 are separated by 241 nucleotides PFR28_04132: PFR28_04132 - Sarcosine oxidase subunit alpha, at 4,719,847 to 4,722,864 _04132 PFR28_04133: PFR28_04133 - Sarcosine oxidase subunit delta, at 4,722,861 to 4,723,190 _04133 PFR28_04134: PFR28_04134 - Sarcosine oxidase subunit beta, at 4,723,206 to 4,724,456 _04134 PFR28_04135: PFR28_04135 - Serine hydroxymethyltransferase, at 4,724,478 to 4,725,731 _04135 PFR28_04136: PFR28_04136 - hypothetical protein, at 4,725,973 to 4,726,677 _04136
Group Condition PFR28_04132 PFR28_04133 PFR28_04134 PFR28_04135 PFR28_04136
carbon source Choline (C) 10 mM -4.8 -5.8 -4.6 -4.8 +0.1
carbon source Betaine (C) 2.5 mM -4.2 -4.7 -5.1 -5.8 -0.1
carbon source sn-glycero-3-phosphocholine (C) -4.9 -5.1 -4.8 -3.9 -0.1
carbon source Choline (C) 10 mM -5.2 -3.8 -5.1 -4.5 +0.1
carbon source sn-glycero-3-phosphocholine (C) 10 mM -4.4 -5.2 -4.8 -3.6 +0.2
carbon source Choline chloride (C) -4.2 -3.3 -5.5 -4.6 -0.1
carbon source Choline chloride (C) -4.9 -4.9 -3.8 -4.1 +0.3
carbon source sn-glycero-3-phosphocholine (C) -4.3 -4.1 -5.3 -3.5 -0.1
carbon source Choline (C) 10 mM -3.8 -5.6 -4.2 -3.6 +0.0
carbon source sn-glycero-3-phosphocholine (C) -4.5 -3.9 -4.5 -4.0 -0.1
carbon source Choline chloride (C) -4.3 -3.4 -4.4 -4.9 +0.1
carbon source sn-glycero-3-phosphocholine (C) 10 mM -3.9 -3.8 -4.1 -3.9 +0.2
carbon source Betaine (C) 2.5 mM -3.9 -3.2 -3.7 -4.3 +0.2
carbon source Betaine (C) 2.5 mM -3.5 -4.2 -4.0 -3.3 +0.2
carbon source sn-glycero-3-phosphocholine (C) 10 mM -3.5 -3.7 -3.8 -2.9 +0.2
carbon source L-Carnitine (C) 10 mM -3.1 -2.9 -3.1 -3.4 +0.1
carbon source L-Carnitine 10 mM (C) -3.1 -3.2 -3.1 -2.6 -0.0
carbon source L-Carnitine 10 mM (C) -2.9 -2.8 -2.7 -2.5 -0.2
carbon source L-Carnitine (C) 10 mM -3.0 -2.3 -2.6 -3.1 -0.0
carbon source L-Carnitine 10 mM (C) -2.9 -2.8 -2.5 -2.6 -0.0
carbon source L-Carnitine (C) -1.7 -1.6 -1.8 -2.0 -0.3
carbon source L-Carnitine (C) -1.3 -1.3 -1.5 -1.2 +0.0
carbon source L-Carnitine (C) -1.2 -1.2 -1.3 -1.5 +0.1
carbon source Betaine (C) -1.1 -1.3 -1.2 -1.0 -0.4
carbon source Quinic Acid (C) -1.1 -1.0 -1.1 -0.9 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.4 -0.3 -0.5 -0.3 +0.2
carbon source Guanosine (C) +0.0 -0.4 +0.5 -0.1 +0.6
carbon source Vanillic Acid (C) 2.5 mM +0.2 +1.2 +0.1 +0.5 +0.5
carbon source Vanillic Acid (C) 2.5 mM +0.1 +1.0 +0.2 +0.5 +0.7
carbon source Vanillic Acid (C) 2.5 mM +0.1 +1.4 +0.0 +1.0 +0.7
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