Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03973 and PFR28_03974 are separated by 178 nucleotidesPFR28_03974 and PFR28_03975 are separated by 102 nucleotidesPFR28_03975 and PFR28_03976 are separated by 158 nucleotidesPFR28_03976 and PFR28_03977 are separated by 222 nucleotides PFR28_03973: PFR28_03973 - Inner membrane transport protein YajR, at 4,556,722 to 4,558,119 _03973 PFR28_03974: PFR28_03974 - UvrABC system protein A, at 4,558,298 to 4,561,132 _03974 PFR28_03975: PFR28_03975 - Bacterioferritin, at 4,561,235 to 4,561,699 _03975 PFR28_03976: PFR28_03976 - Catalase, at 4,561,858 to 4,563,306 _03976 PFR28_03977: PFR28_03977 - 50S ribosomal protein L17, at 4,563,529 to 4,563,915 _03977
Group Condition PFR28_03973 PFR28_03974 PFR28_03975 PFR28_03976 PFR28_03977
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -1.9 +0.2 -0.0 -0.1 N.D.
carbon source Shikimic Acid carbon 10 mM -0.9 +0.1 -0.1 -0.2 N.D.
carbon source octanoate (C) 10 mM -0.4 -0.2 -0.3 -0.2 N.D.
carbon source butyrate (C) 10 mM -0.8 +0.1 -0.2 -0.1 N.D.
carbon source Xanthosine (C) -1.1 -0.1 -0.1 +0.2 N.D.
carbon source D-Galactose carbon 10 mM -0.5 -0.1 -0.3 -0.2 N.D.
carbon source propionate carbon 20 mM -0.6 +0.1 -0.4 -0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.8 -0.1 -0.0 -0.1 N.D.
carbon source Shikimic Acid carbon 10 mM -0.9 +0.1 -0.2 -0.0 N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.8 +0.1 -0.2 -0.0 N.D.
carbon source D(+)-Glucuronic carbon 10 mM -0.7 +0.2 -0.3 -0.1 N.D.
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.9 +0.0 +0.0 +0.1 N.D.
carbon source L-Isoleucine carbon 10 mM -0.4 +0.1 -0.3 -0.2 N.D.
carbon source Xanthosine (C) -1.0 -0.0 +0.1 +0.1 N.D.
carbon source methyl ferulate (C) -1.1 +0.1 +0.0 +0.3 N.D.
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.9 +0.0 -0.0 +0.3 N.D.
stress D-Glucose (C); with Chloride 400 mM -0.9 +0.1 +0.1 +0.1 N.D.
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.8 +0.1 +0.1 +0.1 N.D.
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM -0.8 +0.1 +0.2 +0.0 N.D.
carbon source methyl ferulate (C) -0.9 +0.0 +0.2 +0.1 N.D.
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM -0.8 +0.1 +0.1 +0.1 N.D.
carbon source methyl ferulate (C) -0.9 +0.0 +0.3 +0.1 N.D.
carbon source acetate (C) 30 mM -0.6 +0.1 +0.2 +0.1 N.D.
carbon source Guanosine (C) +0.5 +0.0 -0.1 -0.4 N.D.
stress D-Glucose (C); with Chloride 400 mM -0.5 +0.1 +0.2 +0.2 N.D.
carbon source D-Trehalose (C) 5 mM +0.6 +0.1 -0.1 +0.2 N.D.
carbon source methyl-trans-p-coumarate (C) +1.1 +0.5 +0.2 +0.2 N.D.
carbon source methyl-trans-p-coumarate (C) +1.4 +0.4 +0.1 +0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +2.3 +0.2 -0.2 -0.2 N.D.
carbon source methyl-trans-p-coumarate (C) +1.7 +0.5 +0.3 +0.1 N.D.
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