Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03971 and PFR28_03972 are separated by 79 nucleotidesPFR28_03972 and PFR28_03973 are separated by 9 nucleotidesPFR28_03973 and PFR28_03974 are separated by 178 nucleotidesPFR28_03974 and PFR28_03975 are separated by 102 nucleotides PFR28_03971: PFR28_03971 - Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB, at 4,555,566 to 4,556,120 _03971 PFR28_03972: PFR28_03972 - Single-stranded DNA-binding protein, at 4,556,200 to 4,556,712 _03972 PFR28_03973: PFR28_03973 - Inner membrane transport protein YajR, at 4,556,722 to 4,558,119 _03973 PFR28_03974: PFR28_03974 - UvrABC system protein A, at 4,558,298 to 4,561,132 _03974 PFR28_03975: PFR28_03975 - Bacterioferritin, at 4,561,235 to 4,561,699 _03975
Group Condition PFR28_03971 PFR28_03972 PFR28_03973 PFR28_03974 PFR28_03975
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.4 N.D. -1.9 +0.2 -0.0
carbon source Xanthosine (C) +0.0 N.D. -1.1 -0.1 -0.1
carbon source octanoate (C) 10 mM -0.2 N.D. -0.4 -0.2 -0.3
carbon source Xanthosine (C) -0.1 N.D. -1.0 -0.0 +0.1
carbon source methyl ferulate (C) +0.0 N.D. -1.1 +0.1 +0.0
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.1 N.D. -0.9 +0.0 -0.0
carbon source propionate carbon 20 mM -0.1 N.D. -0.6 +0.1 -0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 N.D. -0.8 +0.1 -0.2
carbon source Ferulic Acid (C) 2.5 mM -0.2 N.D. -0.6 -0.0 -0.1
carbon source butyrate (C) 10 mM +0.0 N.D. -0.8 +0.1 -0.2
carbon source Shikimic Acid carbon 10 mM +0.1 N.D. -0.9 +0.1 -0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.0 N.D. -0.9 +0.0 +0.0
carbon source Shikimic Acid carbon 10 mM +0.1 N.D. -0.9 +0.1 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 N.D. -0.7 +0.1 -0.1
carbon source D(+)-Glucuronic carbon 10 mM +0.1 N.D. -0.7 +0.2 -0.3
carbon source Guanosine (C) +0.2 N.D. -0.6 -0.2 -0.2
stress D-Glucose (C); with Chloride 400 mM +0.0 N.D. -0.9 +0.1 +0.1
carbon source methyl ferulate (C) -0.0 N.D. -0.9 +0.0 +0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM -0.1 N.D. -0.8 +0.1 +0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 N.D. -0.8 +0.1 +0.1
carbon source methyl ferulate (C) -0.0 N.D. -0.9 +0.0 +0.3
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.1 N.D. -0.8 +0.1 +0.1
carbon source L-Lactate (C) +0.1 N.D. -0.6 +0.2 +0.1
carbon source Quinic Acid (C) 10 mM +0.2 N.D. -0.5 +0.2 -0.1
carbon source acetate (C) 30 mM +0.2 N.D. -0.6 +0.1 +0.2
carbon source D-Trehalose (C) 5 mM +0.1 N.D. +0.6 +0.1 -0.1
carbon source methyl-trans-p-coumarate (C) +0.0 N.D. +1.1 +0.5 +0.2
carbon source methyl-trans-p-coumarate (C) +0.2 N.D. +1.4 +0.4 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.2 N.D. +2.3 +0.2 -0.2
carbon source methyl-trans-p-coumarate (C) +0.1 N.D. +1.7 +0.5 +0.3
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