Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03965 and PFR28_03966 overlap by 4 nucleotidesPFR28_03966 and PFR28_03967 overlap by 14 nucleotidesPFR28_03967 and PFR28_03968 are separated by 132 nucleotidesPFR28_03968 and PFR28_03969 overlap by 11 nucleotides PFR28_03965: PFR28_03965 - hypothetical protein, at 4,549,179 to 4,550,000 _03965 PFR28_03966: PFR28_03966 - Cardiolipin synthase B, at 4,549,997 to 4,551,295 _03966 PFR28_03967: PFR28_03967 - Inner membrane protein YbhN, at 4,551,282 to 4,552,298 _03967 PFR28_03968: PFR28_03968 - hypothetical protein, at 4,552,431 to 4,553,189 _03968 PFR28_03969: PFR28_03969 - hypothetical protein, at 4,553,179 to 4,554,288 _03969
Group Condition PFR28_03965 PFR28_03966 PFR28_03967 PFR28_03968 PFR28_03969
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.8 +0.3 -0.1 -0.2 -0.5
carbon source L-Lactate (C) 10 mM -0.0 +0.2 +0.1 -1.2 -0.0
carbon source sn-glycero-3-phosphocholine (C) -0.4 -0.2 +0.1 -0.2 -0.1
carbon source L-Leucine (C) 10 mM -0.0 +0.2 -0.1 -0.5 -0.1
carbon source Vanillic Acid (C) 2.5 mM -0.5 -0.2 -0.0 +0.2 +0.1
carbon source 4-Guanidinobutyric (C) -0.6 +0.1 +0.1 +0.2 -0.2
carbon source L-tyrosine (C) 10 mM +0.1 +0.2 -0.1 -0.7 +0.1
carbon source butyrate (C) -0.1 +0.1 -0.4 +0.2 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 +0.2 -0.2 -0.3 +0.0
carbon source Vanillic Acid (C) 2.5 mM -0.4 +0.1 +0.2 -0.2 +0.2
carbon source methyl-trans-p-coumarate (C) +0.3 -0.0 +0.0 -0.5 +0.2
carbon source L-Lysine (C) 10 mM +0.1 +0.3 -0.1 -0.4 +0.1
carbon source butyrate (C) -0.1 +0.2 -0.2 +0.3 -0.1
carbon source L-Valine (C) 10 mM -0.1 +0.4 +0.1 -0.3 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 +0.1 +0.1 +0.3 +0.0
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.2 +0.1 +0.1 -0.3 +0.2
carbon source L-Carnitine (C) 10 mM +0.1 +0.4 +0.1 -0.1 -0.1
carbon source L-Valine (C) 10 mM +0.4 +0.2 -0.1 -0.2 +0.2
carbon source Choline (C) 10 mM +0.0 +0.2 +0.1 +0.4 -0.2
carbon source gluconate (C) 10 mM +0.1 +0.3 +0.1 +0.3 -0.1
carbon source D-Ribose (C) 10 mM +0.2 +0.3 +0.1 +0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.1 +0.2 -0.0 +0.7 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.6 +0.2 -0.3 +0.2 +0.1
carbon source Guanosine (C) +0.4 +0.1 +0.3 +0.2 -0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 +0.2 +0.2 +0.3 +0.0
carbon source D-Xylose (C) 10 mM +0.2 +0.1 +0.2 +0.3 -0.0
carbon source L-Phenylalanine carbon 5 mM +0.0 +0.4 +0.1 +0.4 +0.0
carbon source Guanosine (C) +0.1 +0.5 -0.1 +0.4 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM +0.2 +0.0 +0.2 +0.5 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 +0.1 +0.4 +0.4 +0.3
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