Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03856 and PFR28_03857 are separated by 50 nucleotidesPFR28_03857 and PFR28_03858 are separated by 365 nucleotidesPFR28_03858 and PFR28_03859 are separated by 73 nucleotidesPFR28_03859 and PFR28_03860 are separated by 104 nucleotides PFR28_03856: PFR28_03856 - LPS-assembly lipoprotein LptE, at 4,433,471 to 4,434,076 _03856 PFR28_03857: PFR28_03857 - DNA polymerase III subunit delta, at 4,434,127 to 4,435,164 _03857 PFR28_03858: PFR28_03858 - hypothetical protein, at 4,435,530 to 4,435,694 _03858 PFR28_03859: PFR28_03859 - Tn3 family transposase TnXax1, at 4,435,768 to 4,437,090 _03859 PFR28_03860: PFR28_03860 - putative murein peptide carboxypeptidase, at 4,437,195 to 4,438,151 _03860
Group Condition PFR28_03856 PFR28_03857 PFR28_03858 PFR28_03859 PFR28_03860
carbon source Shikimic Acid carbon 10 mM -3.2 N.D. N.D. -0.1 -6.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -5.5 N.D. N.D. +0.2 -4.1
carbon source methyl ferulate (C) -3.6 N.D. N.D. +0.2 -5.6
carbon source 4-Acetoxy-3-methoxycinnamic (C) -3.6 N.D. N.D. +0.4 -5.7
carbon source Shikimic Acid carbon 10 mM -2.4 N.D. N.D. -0.1 -6.1
carbon source Shikimic Acid carbon 10 mM -2.4 N.D. N.D. -0.1 -6.0
carbon source L-tyrosine (C) 10 mM -1.9 N.D. N.D. -0.1 -6.2
carbon source D-Fructose (C) 10 mM -2.1 N.D. N.D. +0.0 -6.0
carbon source Quinic Acid (C) 10 mM -1.5 N.D. N.D. -0.1 -6.4
carbon source 4-Acetoxy-3-methoxycinnamic (C) -3.6 N.D. N.D. +0.1 -4.3
carbon source Xanthosine (C) -3.6 N.D. N.D. +0.0 -4.3
carbon source sn-glycero-3-phosphocholine (C) 10 mM -0.9 N.D. N.D. -0.0 -6.8
carbon source Quinic Acid (C) 10 mM -1.3 N.D. N.D. -0.0 -6.3
carbon source caffeic (C) -3.2 N.D. N.D. +0.1 -4.5
carbon source methyl-trans-p-coumarate (C) -3.2 N.D. N.D. -0.1 -4.3
carbon source L-Hydroxyproline (C) 10 mM -1.8 N.D. N.D. -0.1 -5.6
carbon source Betaine (C) 2.5 mM -0.7 N.D. N.D. -0.2 -6.6
carbon source Xanthosine (C) -3.0 N.D. N.D. -0.4 -4.1
carbon source D-Fructose (C) 10 mM -2.1 N.D. N.D. -0.1 -5.3
carbon source Guanosine (C) -2.2 N.D. N.D. -0.0 -5.1
carbon source caffeic (C) -3.4 N.D. N.D. +0.1 -4.0
carbon source D-Mannose carbon 10 mM -1.2 N.D. N.D. -0.3 -5.8
carbon source L-Phenylalanine carbon 5 mM -1.0 N.D. N.D. -0.3 -6.0
carbon source acetate (C) 30 mM -2.1 N.D. N.D. -0.0 -5.0
carbon source methyl ferulate (C) -3.4 N.D. N.D. +0.2 -3.9
carbon source D(+)-Glucuronic carbon 10 mM -2.0 N.D. N.D. -0.1 -5.1
carbon source methyl-trans-p-coumarate (C) -3.0 N.D. N.D. +0.1 -4.0
carbon source Guanosine carbon 10 mM +1.0 N.D. N.D. -0.2 -6.1
carbon source Guanosine carbon 10 mM +1.3 N.D. N.D. -0.2 -5.5
carbon source Xanthosine (C) 10 mM +1.5 N.D. N.D. -0.1 -5.7
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