Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03846 and PFR28_03847 are separated by 138 nucleotidesPFR28_03847 and PFR28_03848 are separated by 133 nucleotidesPFR28_03848 and PFR28_03849 are separated by 204 nucleotidesPFR28_03849 and PFR28_03850 overlap by 32 nucleotides PFR28_03846: PFR28_03846 - hypothetical protein, at 4,422,548 to 4,423,102 _03846 PFR28_03847: PFR28_03847 - hypothetical protein, at 4,423,241 to 4,423,570 _03847 PFR28_03848: PFR28_03848 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, at 4,423,704 to 4,425,032 _03848 PFR28_03849: PFR28_03849 - PhoH-like protein, at 4,425,237 to 4,426,247 _03849 PFR28_03850: PFR28_03850 - Endoribonuclease YbeY, at 4,426,216 to 4,426,698 _03850
Group Condition PFR28_03846 PFR28_03847 PFR28_03848 PFR28_03849 PFR28_03850
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -4.0 -0.4 -0.1 -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -3.5 -0.5 -0.2 -0.2 N.D.
carbon source Shikimic Acid carbon 10 mM -3.7 -0.1 +0.1 -0.2 N.D.
carbon source acetate carbon 10 mM -3.0 +0.0 +0.0 -0.7 N.D.
carbon source Shikimic Acid carbon 10 mM -3.6 +0.0 +0.0 -0.1 N.D.
carbon source propionate carbon 20 mM -3.8 +0.1 +0.1 +0.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -2.4 -0.1 -0.1 -0.9 N.D.
carbon source Shikimic Acid carbon 10 mM -3.3 +0.0 +0.1 -0.1 N.D.
carbon source butyrate (C) 10 mM -1.9 -0.3 -0.2 -0.9 N.D.
carbon source propionate carbon 20 mM -3.4 +0.1 -0.0 -0.0 N.D.
carbon source acetate carbon 10 mM -3.2 -0.2 +0.1 -0.0 N.D.
carbon source caffeic (C) 2.5 mM -1.9 -0.2 -0.1 -0.8 N.D.
carbon source propionate carbon 20 mM -3.2 +0.2 +0.0 +0.1 N.D.
carbon source caffeic (C) 2.5 mM -1.8 -0.2 -0.1 -0.6 N.D.
carbon source propionate (C) 20 mM -2.8 -0.1 -0.1 +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -1.9 -0.3 -0.3 -0.3 N.D.
carbon source Adenosine (C) 10 mM -2.1 +0.2 +0.1 -0.8 N.D.
carbon source propionate (C) 20 mM -2.0 +0.1 -0.2 -0.4 N.D.
carbon source acetate carbon 10 mM -2.8 +0.2 -0.1 +0.1 N.D.
carbon source D-Galacturonic Acid (C) 10 mM -2.2 +0.0 -0.4 +0.1 N.D.
carbon source L-Phenylalanine 5 mM (C) -2.0 -0.1 +0.3 -0.3 N.D.
carbon source L-Phenylalanine 5 mM (C) -2.1 +0.2 +0.3 -0.3 N.D.
carbon source methyl ferulate (C) -1.9 +0.4 -0.4 +0.2 N.D.
carbon source Shikimic Acid (C) 10 mM -2.4 +0.2 +0.0 +0.5 N.D.
carbon source Shikimic Acid (C) 10 mM -2.1 +0.3 +0.1 +0.3 N.D.
carbon source Fumarate (C) 20 mM +2.0 -0.1 -0.1 -0.6 N.D.
carbon source succinate (C) +1.8 +0.3 +0.3 -0.5 N.D.
carbon source Inosine carbon 10 mM +3.6 +0.1 -0.0 -0.6 N.D.
carbon source Inosine carbon 10 mM +3.2 -0.1 -0.1 +0.3 N.D.
carbon source Inosine carbon 10 mM +3.4 -0.2 -0.1 +0.4 N.D.
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