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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_03799 and PFR28_03800 are separated by 21 nucleotides
PFR28_03800 and PFR28_03801 are separated by 3 nucleotides
PFR28_03801 and PFR28_03802 are separated by 516 nucleotides
PFR28_03802 and PFR28_03803 are separated by 86 nucleotides
PFR28_03799: PFR28_03799 - hypothetical protein, at 4,372,317 to 4,372,481
_03799
PFR28_03800: PFR28_03800 - Cytochrome bd-II ubiquinol oxidase subunit 2, at 4,372,503 to 4,373,510
_03800
PFR28_03801: PFR28_03801 - Cytochrome bd-I ubiquinol oxidase subunit 1, at 4,373,514 to 4,374,953
_03801
PFR28_03802: PFR28_03802 - Enterobactin exporter EntS, at 4,375,470 to 4,376,696
_03802
PFR28_03803: PFR28_03803 - Aldehyde oxidoreductase molybdenum-binding subunit PaoC, at 4,376,783 to 4,378,984
_03803
Group
Condition
PFR28
_03799
PFR28
_03800
PFR28
_03801
PFR28
_03802
PFR28
_03803
carbon source
butyrate (C) 10 mM
N.D.
-0.2
-0.3
-0.5
-0.3
carbon source
Guanosine (C)
N.D.
-0.4
+0.0
-0.7
-0.2
carbon source
L-Leucine (C) 10 mM
N.D.
-0.2
-0.2
-0.5
-0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
N.D.
-0.1
-0.3
-0.6
-0.0
carbon source
Quinic Acid (C)
N.D.
-0.3
+0.0
-0.6
-0.0
carbon source
butyrate (C) 10 mM
N.D.
-0.3
-0.1
-0.2
-0.2
carbon source
butyrate (C)
N.D.
-0.2
-0.3
-0.2
-0.1
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
N.D.
-0.2
-0.3
+0.0
-0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct
N.D.
-0.0
-0.3
-0.2
-0.2
carbon source
butyrate (C)
N.D.
-0.2
+0.1
-0.4
-0.1
stress
D-Glucose (C); with Chloride 400 mM
N.D.
-0.3
+0.0
-0.4
-0.1
carbon source
Xanthosine (C)
N.D.
-0.3
-0.0
-0.3
-0.0
carbon source
p-Coumaric (C)
N.D.
-0.2
-0.1
-0.2
-0.2
carbon source
Inosine (C)
N.D.
-0.2
+0.0
-0.4
-0.1
stress
D-Glucose (C); with Chloride 200 mM
N.D.
-0.2
+0.1
-0.3
-0.2
carbon source
p-Coumaric (C)
N.D.
-0.5
-0.2
+0.2
+0.0
carbon source
L-Leucine (C) 10 mM
N.D.
-0.3
+0.1
-0.3
-0.0
carbon source
4-Guanidinobutyric (C)
N.D.
-0.1
+0.2
-0.3
-0.2
carbon source
Vanillic Acid (C) 2.5 mM
N.D.
-0.4
-0.2
-0.2
+0.3
stress
D-Glucose (C); with Chloride 200 mM
N.D.
-0.2
+0.2
-0.3
-0.2
carbon source
L-Lactate (C) 10 mM
N.D.
+0.1
-0.2
-0.4
+0.2
carbon source
caffeic (C)
N.D.
-0.5
+0.2
+0.0
-0.1
carbon source
4-Acetoxy-3-methoxycinnamic (C)
N.D.
-0.1
-0.3
+0.3
-0.2
carbon source
Ferulic Acid (C) 2.5 mM
N.D.
-0.1
-0.3
-0.2
+0.2
carbon source
Ferulic Acid (C) 2.5 mM
N.D.
-0.3
-0.0
-0.2
+0.2
carbon source
Inosine carbon 10 mM
N.D.
-0.3
-0.1
+0.2
+0.1
carbon source
Vanillic Acid (C) 2.5 mM
N.D.
-0.5
+0.0
-0.0
+0.5
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
N.D.
-0.3
-0.1
+0.3
+0.2
carbon source
4-Aminobutyric carbon 10 mM
N.D.
-0.1
-0.2
+0.4
+0.1
carbon source
Betaine (C)
N.D.
-0.1
+0.2
-0.3
+0.3
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PFR28_03801
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