Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03733 and PFR28_03734 overlap by 1 nucleotidesPFR28_03734 and PFR28_03735 overlap by 4 nucleotidesPFR28_03735 and PFR28_03736 overlap by 4 nucleotidesPFR28_03736 and PFR28_03737 are separated by 63 nucleotides PFR28_03733: PFR28_03733 - Type 4 prepilin-like proteins leader peptide-processing enzyme, at 4,304,263 to 4,305,132 _03733 PFR28_03734: PFR28_03734 - Dephospho-CoA kinase, at 4,305,132 to 4,305,755 _03734 PFR28_03735: PFR28_03735 - DNA gyrase inhibitor YacG, at 4,305,752 to 4,305,958 _03735 PFR28_03736: PFR28_03736 - hypothetical protein, at 4,305,955 to 4,306,170 _03736 PFR28_03737: PFR28_03737 - hypothetical protein, at 4,306,234 to 4,306,920 _03737
Group Condition PFR28_03733 PFR28_03734 PFR28_03735 PFR28_03736 PFR28_03737
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.5 N.D. N.D. -4.3 +0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -1.8 N.D. N.D. -1.7 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.8 N.D. N.D. -1.4 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.4 N.D. N.D. -0.3 -0.1
carbon source caffeic (C) 2.5 mM -0.6 N.D. N.D. -1.2 +0.0
carbon source L-Leucine (C) 10 mM -0.7 N.D. N.D. -1.0 -0.1
carbon source caffeic (C) 2.5 mM -0.2 N.D. N.D. -1.5 -0.0
carbon source caffeic (C) 2.5 mM -0.4 N.D. N.D. -1.0 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.3 N.D. N.D. -1.2 +0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.4 N.D. N.D. -0.9 +0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.2 N.D. N.D. -1.4 -0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.5 N.D. N.D. -0.7 +0.0
carbon source p-Coumaric (C) 2.5 mM -0.2 N.D. N.D. -1.0 +0.1
carbon source L-Carnitine 10 mM (C) +0.1 N.D. N.D. -0.9 -0.2
carbon source Vanillic Acid (C) 2.5 mM -0.7 N.D. N.D. +0.4 +0.1
carbon source butyrate (C) 10 mM +0.4 N.D. N.D. -0.7 +0.1
carbon source Glycocyamine 20 mM (C) +0.5 N.D. N.D. -0.7 -0.0
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.6 N.D. N.D. +0.5 +0.3
carbon source L-Lactate (C) 10 mM -0.4 N.D. N.D. +0.7 -0.1
carbon source L-Lactate (C) -0.4 N.D. N.D. +0.7 +0.1
carbon source Xanthosine (C) -0.4 N.D. N.D. +0.8 +0.1
carbon source L-Lactate (C) -0.3 N.D. N.D. +1.0 -0.1
carbon source Inosine carbon 10 mM -0.4 N.D. N.D. +0.8 +0.2
carbon source sn-glycero-3-phosphocholine (C) -0.3 N.D. N.D. +1.1 +0.0
carbon source Guanosine (C) -0.4 N.D. N.D. +1.1 +0.1
carbon source L-Carnitine (C) -0.1 N.D. N.D. +1.2 +0.1
carbon source Xanthosine (C) -0.1 N.D. N.D. +1.1 +0.1
carbon source Guanosine (C) -0.4 N.D. N.D. +1.3 +0.3
carbon source Betaine (C) -0.2 N.D. N.D. +1.6 -0.1
carbon source butyrate (C) 10 mM +0.4 N.D. N.D. +0.8 +0.3
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