Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03692 and PFR28_03693 are separated by 66 nucleotidesPFR28_03693 and PFR28_03694 are separated by 545 nucleotidesPFR28_03694 and PFR28_03695 overlap by 1 nucleotidesPFR28_03695 and PFR28_03696 are separated by 75 nucleotides PFR28_03692: PFR28_03692 - tRNA-Ile, at 4,258,381 to 4,258,457 _03692 PFR28_03693: PFR28_03693 - 16S ribosomal RNA, at 4,258,524 to 4,260,055 _03693 PFR28_03694: PFR28_03694 - Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 4,260,601 to 4,261,221 _03694 PFR28_03695: PFR28_03695 - Protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 4,261,221 to 4,262,237 _03695 PFR28_03696: PFR28_03696 - hypothetical protein, at 4,262,313 to 4,263,158 _03696
Group Condition PFR28_03692 PFR28_03693 PFR28_03694 PFR28_03695 PFR28_03696
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM N.D. N.D. +0.1 +0.0 -3.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. +0.1 -0.0 -2.7
carbon source L-Hydroxyproline (C) 10 mM N.D. N.D. +0.1 -0.2 -2.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.1 +0.0 -2.2
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -0.0 -0.1 -1.9
carbon source methyl-trans-p-coumarate (C) N.D. N.D. -0.2 -0.1 -1.8
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. +0.1 -0.1 -2.0
carbon source L-Hydroxyproline (C) 10 mM N.D. N.D. +0.1 -0.2 -1.9
carbon source methyl ferulate (C) N.D. N.D. -0.2 +0.0 -1.7
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -0.0 -0.2 -1.7
carbon source L-Hydroxyproline (C) 10 mM N.D. N.D. +0.0 +0.1 -1.9
carbon source caffeic (C) 2.5 mM N.D. N.D. +0.1 -0.0 -1.8
carbon source methyl ferulate (C) N.D. N.D. +0.0 -0.1 -1.6
carbon source D(+)-Glucuronic carbon 10 mM N.D. N.D. -0.0 -0.2 -1.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.0 -0.1 -1.6
carbon source NAG (C) 10 mM N.D. N.D. -0.0 +0.0 -1.7
carbon source D-Glucuronic (C) 10 mM N.D. N.D. +0.0 -0.1 -1.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.0 -0.1 -1.5
carbon source Inosine (C) N.D. N.D. +0.0 -0.1 -1.4
carbon source caffeic (C) 2.5 mM N.D. N.D. +0.1 +0.0 -1.5
carbon source Xanthosine (C) N.D. N.D. +0.1 +0.1 -1.6
carbon source D-Glucuronic (C) 10 mM N.D. N.D. +0.2 -0.1 -1.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. N.D. -0.2 +0.4 -1.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. +0.3 +0.1 -1.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. +0.3 +0.3 -1.4
carbon source Citric Acid (C) 10 mM N.D. N.D. +0.0 +0.1 +1.4
carbon source sn-glycero-3-phosphocholine (C) N.D. N.D. +0.3 +0.1 +1.2
carbon source Citric Acid (C) 10 mM N.D. N.D. +0.1 +0.2 +1.5
carbon source L-Carnitine (C) 10 mM N.D. N.D. +0.1 +0.1 +1.6
carbon source L-Carnitine (C) 10 mM N.D. N.D. +0.2 +0.2 +1.6
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