Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03665 and PFR28_03666 are separated by 4 nucleotidesPFR28_03666 and PFR28_03667 are separated by 82 nucleotidesPFR28_03667 and PFR28_03668 are separated by 313 nucleotidesPFR28_03668 and PFR28_03669 are separated by 589 nucleotides PFR28_03665: PFR28_03665 - hypothetical protein, at 4,225,947 to 4,226,534 _03665 PFR28_03666: PFR28_03666 - hypothetical protein, at 4,226,539 to 4,226,982 _03666 PFR28_03667: PFR28_03667 - hypothetical protein, at 4,227,065 to 4,228,618 _03667 PFR28_03668: PFR28_03668 - Methyl-accepting chemotaxis protein McpU, at 4,228,932 to 4,231,094 _03668 PFR28_03669: PFR28_03669 - Fosmidomycin resistance protein, at 4,231,684 to 4,232,901 _03669
Group Condition PFR28_03665 PFR28_03666 PFR28_03667 PFR28_03668 PFR28_03669
carbon source Shikimic Acid carbon 10 mM -0.1 -3.8 -0.0 -0.0 -0.2
carbon source Xanthosine (C) 10 mM -0.3 -3.8 +0.1 -0.0 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -3.5 -0.4 -0.0 +0.1
carbon source D(+)-Glucuronic carbon 10 mM -0.2 -2.5 -0.2 -0.1 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -3.5 +0.4 +0.2 +0.3
carbon source Glycocyamine 10 mM (C) +0.1 -2.3 -0.3 +0.0 -0.2
carbon source Shikimic Acid carbon 10 mM +0.1 -2.6 +0.1 -0.1 -0.2
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.2 -2.2 -0.2 -0.0 +0.0
carbon source Choline (C) 10 mM +0.2 -2.9 +0.2 +0.0 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 -2.1 +0.3 -0.2 -0.3
carbon source Fumarate (C) 20 mM +0.1 -2.2 -0.2 +0.1 -0.1
carbon source Quinic Acid (C) 10 mM +0.1 -2.5 -0.0 +0.1 -0.1
carbon source Inosine carbon 10 mM -0.5 -1.9 +0.2 +0.0 -0.2
carbon source a-Ketoglutaric (C) 10 mM -0.0 -2.4 +0.1 -0.1 +0.1
carbon source octanoate (C) -0.2 -1.8 +0.1 -0.2 -0.2
carbon source D-Trehalose (C) 5 mM -0.0 -2.3 -0.1 +0.1 -0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.1 -2.5 +0.0 +0.0 +0.0
carbon source a-Ketoglutaric (C) 10 mM +0.1 -2.3 -0.1 +0.1 -0.1
carbon source propionate carbon 20 mM +0.1 -2.3 -0.2 +0.0 +0.1
carbon source D-Ribose (C) 10 mM +0.1 -2.3 +0.0 +0.0 -0.0
carbon source L-Lactate (C) 10 mM +0.4 -2.0 +0.1 -0.4 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.5 -1.4 +0.2 -0.3 +0.1
carbon source Glycerol (C) 20 mM +0.3 -1.8 -0.3 -0.1 -0.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.3 -2.3 +0.1 +0.0 +0.0
carbon source butyrate (C) +0.3 -1.6 -0.2 -0.3 -0.1
carbon source D-Glucuronic (C) 10 mM +0.5 -1.7 -0.2 -0.1 +0.0
carbon source caffeic (C) +0.3 -1.9 +0.3 -0.0 -0.1
carbon source caffeic (C) +0.4 -1.6 +0.4 +0.0 -0.2
carbon source Guanosine (C) +0.1 +1.3 +0.4 -0.5 -0.4
carbon source Quinic Acid (C) -0.1 +2.2 +0.2 +0.0 -0.1
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