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Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_03424 and PFR28_03425 are separated by 71 nucleotides
PFR28_03425 and PFR28_03426 are separated by 142 nucleotides
PFR28_03426 and PFR28_03427 are separated by 45 nucleotides
PFR28_03427 and PFR28_03428 are separated by 2 nucleotides
PFR28_03424: PFR28_03424 - Small-conductance mechanosensitive channel, at 3,931,807 to 3,932,649
_03424
PFR28_03425: PFR28_03425 - hypothetical protein, at 3,932,721 to 3,933,206
_03425
PFR28_03426: PFR28_03426 - 2-dehydropantoate 2-reductase, at 3,933,349 to 3,934,266
_03426
PFR28_03427: PFR28_03427 - Sensor histidine kinase RcsC, at 3,934,312 to 3,936,348
_03427
PFR28_03428: PFR28_03428 - Cobalamin adenosyltransferase, at 3,936,351 to 3,936,932
_03428
Group
Condition
PFR28
_03424
PFR28
_03425
PFR28
_03426
PFR28
_03427
PFR28
_03428
carbon source
butyrate (C) 10 mM
-0.4
-5.2
-0.2
-2.6
-0.2
carbon source
methyl ferulate (C)
-0.5
-3.2
+0.2
-1.7
-0.3
carbon source
L-Isoleucine (C) 10 mM
-0.3
-0.6
-0.5
-2.8
-0.0
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.8
-0.4
-0.1
-2.6
-0.0
carbon source
Guanosine (C)
+0.1
-3.0
+0.3
-0.7
-0.6
carbon source
methyl ferulate (C)
-0.4
-0.9
+0.2
-2.3
-0.3
carbon source
methyl-trans-p-coumarate (C)
-0.0
-2.4
+0.5
-1.3
-0.2
carbon source
L-Valine (C) 10 mM
-0.3
-0.2
+0.0
-2.6
-0.2
carbon source
L-Valine (C) 10 mM
-0.2
+0.1
+0.2
-3.2
-0.2
carbon source
L-Isoleucine (C) 10 mM
-0.0
+0.2
-0.5
-3.0
+0.0
carbon source
Malonic (C) 10 mM
-0.5
-0.4
-0.1
-2.3
+0.0
carbon source
Quinic Acid (C)
-0.6
-1.4
-0.2
-0.9
-0.1
carbon source
m-Inositol (C) 10 mM
-0.1
-0.8
-0.1
-2.0
-0.1
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.4
-0.2
+0.0
-2.2
-0.2
carbon source
caffeic (C) 2.5 mM
-0.0
-0.9
+0.1
-2.0
-0.0
carbon source
p-Coumaric (C) 2.5 mM
-0.3
-0.4
+0.1
-2.2
+0.1
carbon source
caffeic (C) 2.5 mM
-0.1
-0.4
+0.2
-2.3
+0.1
carbon source
Malonic (C) 10 mM
-0.2
-0.3
+0.3
-2.1
-0.1
carbon source
L-Valine (C) 10 mM
+0.1
+0.0
+0.1
-2.8
+0.2
carbon source
L-Leucine (C) 10 mM
+0.0
-0.2
-2.7
+0.5
+0.0
carbon source
p-Coumaric (C) 2.5 mM
-0.3
-0.4
+0.2
-2.0
+0.2
carbon source
L-Leucine (C) 10 mM
-0.2
+0.7
-2.8
+0.1
-0.1
carbon source
L-Isoleucine carbon 10 mM
+0.2
+0.2
-0.5
-2.0
-0.2
carbon source
L-Isoleucine carbon 10 mM
-0.2
+0.7
-0.2
-2.5
+0.1
carbon source
L-Valine (C) 10 mM
+0.0
+0.4
+0.1
-2.4
-0.1
carbon source
L-Leucine (C) 10 mM
+0.2
-0.2
-2.7
+0.7
+0.2
carbon source
methyl-trans-p-coumarate (C)
-0.8
+0.4
+0.2
-1.3
-0.3
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.0
-1.3
+0.7
-0.7
+0.2
carbon source
Azelaic carbon 10 mM
+0.4
+0.8
+0.0
-1.8
-0.3
carbon source
Choline (C) 10 mM
+0.1
+1.2
+0.2
-1.5
-0.1
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