Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_03408 and PFR28_03409 overlap by 1 nucleotidesPFR28_03409 and PFR28_03410 are separated by 14 nucleotidesPFR28_03410 and PFR28_03411 overlap by 11 nucleotidesPFR28_03411 and PFR28_03412 are separated by 128 nucleotides PFR28_03408: PFR28_03408 - hypothetical protein, at 3,918,254 to 3,919,315 _03408 PFR28_03409: PFR28_03409 - Biopolymer transport protein ExbD, at 3,919,315 to 3,919,776 _03409 PFR28_03410: PFR28_03410 - Tol-Pal system protein TolQ, at 3,919,791 to 3,920,486 _03410 PFR28_03411: PFR28_03411 - Acyl-CoA thioester hydrolase YbgC, at 3,920,476 to 3,920,943 _03411 PFR28_03412: PFR28_03412 - Holliday junction ATP-dependent DNA helicase RuvB, at 3,921,072 to 3,922,133 _03412
Group Condition PFR28_03408 PFR28_03409 PFR28_03410 PFR28_03411 PFR28_03412
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. N.D. -1.1 -3.5
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. N.D. -0.7 -3.5
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. N.D. -0.5 -3.0
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. N.D. +0.4 -3.8
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. N.D. +0.5 -3.8
carbon source Shikimic Acid carbon 10 mM N.D. N.D. N.D. -0.6 -2.5
carbon source Xanthosine (C) 10 mM N.D. N.D. N.D. -0.6 -2.4
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. N.D. +0.3 -3.3
carbon source Cytidine carbon 10 mM N.D. N.D. N.D. -0.6 -2.3
carbon source sn-glycero-3-phosphocholine (C) 10 mM N.D. N.D. N.D. -0.2 -2.6
carbon source caffeic (C) N.D. N.D. N.D. +0.3 -3.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM N.D. N.D. N.D. -0.2 -2.5
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. N.D. -0.4 -2.2
carbon source D-Glucosamine Hydrochloride carbon 10 mM N.D. N.D. N.D. -0.5 -2.0
carbon source Guanosine carbon 10 mM N.D. N.D. N.D. -0.3 -2.1
carbon source D-Glucosamine Hydrochloride carbon 10 mM N.D. N.D. N.D. -0.3 -2.2
carbon source Guanosine carbon 10 mM N.D. N.D. N.D. -0.3 -2.1
carbon source Cytidine (C) N.D. N.D. N.D. +0.0 -2.5
carbon source D-Mannitol carbon 10 mM N.D. N.D. N.D. -0.2 -2.2
carbon source methyl ferulate (C) N.D. N.D. N.D. +0.3 -2.7
carbon source D-Glucosamine Hydrochloride carbon 10 mM N.D. N.D. N.D. -0.2 -2.2
carbon source propionate carbon 20 mM N.D. N.D. N.D. -0.3 -2.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM N.D. N.D. N.D. -0.0 -2.3
carbon source D-Galactose carbon 10 mM N.D. N.D. N.D. -0.3 -2.0
carbon source Xanthosine (C) N.D. N.D. N.D. +0.5 -2.4
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. N.D. +0.4 -2.0
carbon source methyl-trans-p-coumarate (C) N.D. N.D. N.D. +0.4 -2.1
carbon source 4-Acetoxy-3-methoxycinnamic (C) N.D. N.D. N.D. +0.5 -1.9
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. N.D. +0.5 -1.9
carbon source butyrate (C) N.D. N.D. N.D. +0.8 -1.7
remove
PFR28_03408
plot		 remove
PFR28_03409
plot		 remove
PFR28_03410		 remove
PFR28_03411
plot		 remove
PFR28_03412
plot