Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03403 and PFR28_03404 are separated by 1 nucleotidesPFR28_03404 and PFR28_03405 are separated by 162 nucleotidesPFR28_03405 and PFR28_03406 are separated by 6 nucleotidesPFR28_03406 and PFR28_03407 are separated by 52 nucleotides PFR28_03403: PFR28_03403 - 7-cyano-7-deazaguanine synthase, at 3,914,065 to 3,914,757 _03403 PFR28_03404: PFR28_03404 - 7-carboxy-7-deazaguanine synthase, at 3,914,759 to 3,915,406 _03404 PFR28_03405: PFR28_03405 - Cell division coordinator CpoB, at 3,915,569 to 3,916,399 _03405 PFR28_03406: PFR28_03406 - Peptidoglycan-associated lipoprotein, at 3,916,406 to 3,916,903 _03406 PFR28_03407: PFR28_03407 - Tol-Pal system protein TolB, at 3,916,956 to 3,918,257 _03407
Group Condition PFR28_03403 PFR28_03404 PFR28_03405 PFR28_03406 PFR28_03407
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -1.0 -0.7 -1.3 N.D. N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.0 +0.3 -2.3 N.D. N.D.
carbon source L-tyrosine 5 mM (C) -0.3 -0.1 -1.4 N.D. N.D.
carbon source butyrate (C) +0.3 -1.8 -0.2 N.D. N.D.
carbon source Glycocyamine 20 mM (C) -0.7 -0.7 -0.3 N.D. N.D.
carbon source Glycocyamine 10 mM (C) +0.1 -1.0 -0.6 N.D. N.D.
carbon source L-tyrosine 5 mM (C) -0.2 +0.1 -1.1 N.D. N.D.
carbon source methyl-trans-p-coumarate (C) +0.0 +0.2 -1.4 N.D. N.D.
carbon source Guanosine (C) +0.3 -0.2 -1.4 N.D. N.D.
carbon source L-Phenylalanine carbon 5 mM +0.3 -1.1 +0.2 N.D. N.D.
carbon source Quinic Acid (C) 10 mM -0.3 -0.5 +0.6 N.D. N.D.
carbon source Guanosine (C) -0.4 +0.9 -0.6 N.D. N.D.
carbon source Quinic Acid (C) +0.2 +0.8 -0.5 N.D. N.D.
carbon source L-Carnitine (C) +0.5 +0.5 -0.5 N.D. N.D.
carbon source Inosine (C) +0.6 +0.6 -0.5 N.D. N.D.
carbon source trans-aconitic (C) +0.6 +0.5 -0.4 N.D. N.D.
carbon source Choline chloride (C) +0.4 +0.7 -0.3 N.D. N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.6 +0.6 -0.4 N.D. N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.4 +1.0 -0.3 N.D. N.D.
carbon source D-Ribose (C) 10 mM +0.5 +0.2 +0.7 N.D. N.D.
carbon source Xanthosine (C) 10 mM +0.3 +0.5 +0.6 N.D. N.D.
carbon source D-Ribose carbon 10 mM +0.2 +0.4 +0.8 N.D. N.D.
carbon source L-Isoleucine carbon 10 mM +0.0 +0.1 +1.3 N.D. N.D.
carbon source Inosine carbon 10 mM +0.7 +0.4 +0.4 N.D. N.D.
carbon source Vanillic Acid (C) 2.5 mM +0.5 +0.6 +0.7 N.D. N.D.
carbon source Inosine carbon 10 mM +0.6 +0.6 +0.6 N.D. N.D.
carbon source L-Isoleucine carbon 10 mM +0.1 +0.2 +1.5 N.D. N.D.
carbon source D-Xylose (C) 10 mM +0.4 +0.2 +1.4 N.D. N.D.
carbon source D-Xylose (C) 10 mM +0.4 +0.5 +1.2 N.D. N.D.
carbon source Inosine carbon 10 mM +0.7 +0.8 +0.7 N.D. N.D.
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