Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03355 and PFR28_03356 overlap by 4 nucleotidesPFR28_03356 and PFR28_03357 are separated by 102 nucleotidesPFR28_03357 and PFR28_03358 are separated by 296 nucleotidesPFR28_03358 and PFR28_03359 are separated by 199 nucleotides PFR28_03355: PFR28_03355 - Dihydroorotase, at 3,861,970 to 3,863,016 _03355 PFR28_03356: PFR28_03356 - Ribonuclease T, at 3,863,013 to 3,863,690 _03356 PFR28_03357: PFR28_03357 - Alkyl hydroperoxide reductase C, at 3,863,793 to 3,864,395 _03357 PFR28_03358: PFR28_03358 - Bacterioferritin-associated ferredoxin, at 3,864,692 to 3,864,910 _03358 PFR28_03359: PFR28_03359 - Bacterioferritin, at 3,865,110 to 3,865,583 _03359
Group Condition PFR28_03355 PFR28_03356 PFR28_03357 PFR28_03358 PFR28_03359
carbon source butyrate (C) 10 mM N.D. N.D. -0.1 -1.8 -0.8
carbon source butyrate (C) 10 mM N.D. N.D. -0.2 -1.4 -0.2
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -0.2 -0.3 -1.3
carbon source L-Lysine (C) 10 mM N.D. N.D. -0.3 -0.3 -1.1
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -0.2 -0.4 -1.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -0.3 -0.3 -1.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM N.D. N.D. -0.1 -0.4 -1.2
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -0.3 -0.2 -1.1
carbon source caffeic (C) 2.5 mM N.D. N.D. -0.2 -0.1 -1.1
carbon source L-Lysine (C) 10 mM N.D. N.D. -0.2 -0.4 -0.8
carbon source Betaine (C) 2.5 mM N.D. N.D. -0.3 -0.4 -0.5
carbon source Vanillic Acid (C) 2.5 mM N.D. N.D. -0.2 -0.2 -0.9
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -0.1 -0.4 -0.7
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -0.2 -0.1 -0.9
carbon source sn-glycero-3-phosphocholine (C) 10 mM N.D. N.D. -0.4 -0.1 -0.7
carbon source Uridine (C) 10 mM N.D. N.D. -0.1 -0.5 -0.5
carbon source Betaine (C) 2.5 mM N.D. N.D. -0.5 -0.2 -0.4
carbon source caffeic (C) 2.5 mM N.D. N.D. -0.2 +0.0 -1.0
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -0.3 +0.0 -0.8
carbon source L-Lactate (C) 10 mM N.D. N.D. -0.4 -0.6 -0.1
carbon source D-Ribose carbon 10 mM N.D. N.D. -0.3 -0.1 -0.7
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.2 -0.1 -1.0
carbon source Vanillic Acid (C) 2.5 mM N.D. N.D. -0.4 +0.5 -1.0
carbon source Vanillic Acid (C) 2.5 mM N.D. N.D. -0.6 +0.3 -0.6
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.2 -0.2 -0.9
carbon source L-Leucine (C) 10 mM N.D. N.D. +0.2 -0.0 -1.0
carbon source L-Leucine (C) 10 mM N.D. N.D. +0.2 -0.1 -0.8
carbon source L-Leucine (C) 10 mM N.D. N.D. +0.1 +0.2 -1.0
carbon source Guanosine (C) N.D. N.D. +0.4 -0.5 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. N.D. +0.3 +0.1 +0.7
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