Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03321 and PFR28_03322 are separated by 211 nucleotidesPFR28_03322 and PFR28_03323 are separated by 7 nucleotidesPFR28_03323 and PFR28_03324 are separated by 326 nucleotidesPFR28_03324 and PFR28_03325 are separated by 66 nucleotides PFR28_03321: PFR28_03321 - Protein YciI, at 3,828,205 to 3,828,504 _03321 PFR28_03322: PFR28_03322 - hypothetical protein, at 3,828,716 to 3,829,126 _03322 PFR28_03323: PFR28_03323 - Transcriptional regulatory protein CpxR, at 3,829,134 to 3,829,811 _03323 PFR28_03324: PFR28_03324 - hypothetical protein, at 3,830,138 to 3,830,572 _03324 PFR28_03325: PFR28_03325 - Adaptive-response sensory-kinase SasA, at 3,830,639 to 3,831,979 _03325
Group Condition PFR28_03321 PFR28_03322 PFR28_03323 PFR28_03324 PFR28_03325
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.6 -0.9 -0.7 -0.8 -0.4
carbon source L-Lactate (C) 10 mM -1.1 -0.9 +0.5 -1.9 +0.2
carbon source 4-Guanidinobutyric (C) -2.7 -0.6 +0.4 -0.3 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 -0.7 +0.6 -2.6 +0.2
carbon source Inosine carbon 10 mM -2.0 -1.1 +0.4 -0.3 +0.0
carbon source Xanthosine (C) -1.3 -1.5 -0.1 -0.1 -0.1
carbon source Glycerol carbon 20 mM -0.4 -0.4 -0.6 -1.0 +0.1
carbon source L-Lactate (C) 10 mM -1.1 -0.2 -0.6 -0.4 +0.2
carbon source D-Trehalose (C) 5 mM -0.8 -0.4 -0.4 -0.5 +0.1
carbon source L-tyrosine (C) 10 mM +0.2 -1.2 +0.4 -1.4 +0.1
carbon source L-Valine (C) 10 mM -0.1 +0.2 -0.7 -1.1 +0.0
carbon source D-(+)-Galactosamine (C) 10 mM +0.3 -1.0 -0.3 -0.5 -0.1
carbon source Guanosine (C) -0.4 -0.3 +0.5 -0.9 -0.4
carbon source Cytidine carbon 10 mM +0.4 -1.0 -1.2 +0.4 -0.0
carbon source sn-glycero-3-phosphocholine (C) +0.5 -0.8 +0.2 -0.9 -0.2
carbon source Azelaic carbon 10 mM -0.4 +0.3 -0.5 -1.0 +0.3
carbon source Choline (C) 10 mM -0.1 -1.0 -0.0 -0.5 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.5 +0.3 -0.8 -1.0 -0.2
carbon source Adenosine (C) 10 mM -0.3 -0.9 -0.5 +0.4 +0.2
carbon source succinate (C) -0.5 -0.5 +0.7 -0.7 -0.0
carbon source Glycocyamine 20 mM (C) -0.6 -0.4 -0.3 +0.8 -0.2
carbon source D-Ribose (C) 10 mM -0.8 -0.1 +0.5 -0.5 +0.2
carbon source Xanthosine (C) +0.5 -1.0 +0.4 -0.3 +0.1
carbon source butyrate (C) 10 mM +1.1 -0.3 +0.1 -1.3 +0.3
carbon source L-Hydroxyproline carbon 10 mM -0.4 +0.3 +0.7 -0.6 +0.1
carbon source Glycocyamine 10 mM (C) +0.4 -1.2 +0.4 +0.4 +0.0
carbon source D-Ribose carbon 10 mM -1.0 +0.3 +0.6 +0.0 +0.2
carbon source butyrate (C) 10 mM +1.7 +0.9 -0.4 -2.1 +0.0
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.1 -0.5 -0.0 +1.3 -0.2
carbon source butyrate (C) -0.8 +0.8 +0.8 -0.0 +0.0
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PFR28_03325
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