Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_03233 and PFR28_03234 overlap by 8 nucleotidesPFR28_03234 and PFR28_03235 are separated by 89 nucleotidesPFR28_03235 and PFR28_03236 are separated by 81 nucleotidesPFR28_03236 and PFR28_03237 are separated by 421 nucleotides PFR28_03233: PFR28_03233 - NAD(P)H dehydrogenase (quinone), at 3,741,195 to 3,741,800 _03233 PFR28_03234: PFR28_03234 - hypothetical protein, at 3,741,793 to 3,742,218 _03234 PFR28_03235: PFR28_03235 - hypothetical protein, at 3,742,308 to 3,742,982 _03235 PFR28_03236: PFR28_03236 - tRNA-cytidine(32) 2-sulfurtransferase, at 3,743,064 to 3,743,888 _03236 PFR28_03237: PFR28_03237 - Inner membrane protein YohC, at 3,744,310 to 3,744,912 _03237
Group Condition PFR28_03233 PFR28_03234 PFR28_03235 PFR28_03236 PFR28_03237
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -2.1 +0.1 -1.0 +0.3 -2.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.9 -0.1 -0.6 +0.2 -2.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.1 +0.1 +0.0 +0.5 -2.9
carbon source Vanillic Acid (C) 2.5 mM -0.2 +0.2 -1.2 +0.1 -2.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -0.1 -0.5 +0.4 -2.8
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.2 -0.3 -0.5 +0.2 -2.5
carbon source p-Coumaric (C) 2.5 mM -0.7 +0.1 -0.2 +0.2 -2.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.5 -0.1 -0.6 +0.3 -2.1
carbon source caffeic (C) 2.5 mM -0.8 -0.0 +0.1 +0.0 -2.2
carbon source p-Coumaric (C) 2.5 mM -0.4 -0.1 -0.1 +0.2 -2.3
carbon source methyl-trans-p-coumarate (C) -1.3 -0.0 -0.8 -0.4 -0.2
carbon source p-Coumaric (C) 2.5 mM +0.1 -0.1 -0.5 +0.1 -2.2
carbon source caffeic (C) 2.5 mM -0.7 +0.1 -0.2 +0.3 -2.1
carbon source Ferulic Acid (C) 2.5 mM -0.2 +0.0 -0.1 +0.2 -2.3
carbon source Ferulic Acid (C) 2.5 mM +0.1 -0.1 -0.3 +0.3 -2.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 +0.0 -0.4 +0.3 -2.3
carbon source Vanillic Acid (C) 2.5 mM +0.1 +0.3 -0.4 +0.1 -2.2
carbon source Ferulic Acid (C) 2.5 mM -0.2 +0.2 +0.0 +0.4 -2.2
carbon source caffeic (C) 2.5 mM -0.0 +0.1 +0.1 +0.0 -2.0
carbon source Vanillic Acid (C) 2.5 mM +0.5 +0.2 -0.5 +0.4 -2.0
carbon source Guanosine (C) +0.5 -0.0 -1.3 -0.6 +0.0
carbon source L-Lactate (C) 10 mM -0.7 +0.2 -0.2 -0.3 -0.3
carbon source Betaine (C) -0.8 -0.1 +0.2 -0.5 -0.1
carbon source L-Lysine (C) 10 mM -0.8 -0.2 -0.5 +0.1 +0.3
carbon source Xanthosine (C) -0.8 +0.3 -0.4 +0.1 -0.2
carbon source butyrate (C) 10 mM -0.2 -0.5 +0.5 -0.1 -0.3
carbon source Cytidine (C) +0.6 +0.1 -1.3 -0.2 +0.4
carbon source Xanthosine (C) 10 mM -0.7 +0.0 -0.3 +0.1 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 -0.3 +0.7 +0.3 -0.3
carbon source Cytidine (C) +1.1 -0.4 -0.4 +0.2 +0.7
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