Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_03103 and PFR28_03104 are separated by 316 nucleotidesPFR28_03104 and PFR28_03105 are separated by 374 nucleotidesPFR28_03105 and PFR28_03106 overlap by 8 nucleotidesPFR28_03106 and PFR28_03107 are separated by 132 nucleotides PFR28_03103: PFR28_03103 - Inner membrane protein YjcH, at 3,609,286 to 3,609,597 _03103 PFR28_03104: PFR28_03104 - hypothetical protein, at 3,609,914 to 3,610,768 _03104 PFR28_03105: PFR28_03105 - hypothetical protein, at 3,611,143 to 3,612,441 _03105 PFR28_03106: PFR28_03106 - hypothetical protein, at 3,612,434 to 3,613,222 _03106 PFR28_03107: PFR28_03107 - Inner membrane protein YedI, at 3,613,355 to 3,614,269 _03107
Group Condition PFR28_03103 PFR28_03104 PFR28_03105 PFR28_03106 PFR28_03107
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -1.2 +0.7 -2.5 -2.1 -0.3
carbon source Vanillic Acid (C) 2.5 mM -1.0 -0.0 -1.8 -1.7 +0.1
carbon source Vanillic Acid (C) 2.5 mM -1.3 +0.5 -1.6 -1.5 -0.4
carbon source Vanillic Acid (C) 2.5 mM -1.2 -0.1 -1.5 -1.4 -0.0
carbon source p-Coumaric (C) 2.5 mM -1.0 +0.2 -1.6 -1.5 -0.3
carbon source Ferulic Acid (C) 2.5 mM -1.0 +0.0 -1.7 -1.3 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.2 -0.1 -1.5 -1.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -1.2 +0.3 -1.5 -1.2 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.1 -0.0 -1.4 -1.3 -0.1
carbon source p-Coumaric (C) 2.5 mM -0.9 +0.3 -1.7 -1.5 +0.0
carbon source p-Coumaric (C) 2.5 mM -1.0 +0.2 -1.6 -1.4 -0.0
carbon source Ferulic Acid (C) 2.5 mM -0.8 +0.1 -1.6 -1.3 -0.1
carbon source caffeic (C) 2.5 mM -0.8 +0.0 -1.4 -1.2 -0.3
carbon source Ferulic Acid (C) 2.5 mM -0.9 +0.2 -1.6 -1.4 -0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -1.2 +0.2 -1.3 -1.0 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 -0.0 -1.5 -1.2 +0.4
carbon source caffeic (C) 2.5 mM -0.8 +0.3 -0.9 -0.8 -0.3
carbon source butyrate (C) 10 mM -0.3 -0.4 +1.0 +1.0 -0.5
carbon source L-Lactate (C) 10 mM -0.1 -1.0 +1.0 +1.0 +0.4
carbon source Uridine (C) 10 mM -0.2 -0.7 +0.9 +1.3 +0.0
carbon source L-Valine (C) 10 mM -0.5 -0.6 +0.9 +1.2 +0.4
carbon source L-Malic (C) 10 mM -0.2 -0.5 +1.1 +1.3 -0.1
carbon source Quinic Acid (C) 10 mM -0.4 -0.4 +0.9 +1.3 +0.2
carbon source D,L-Malic Acid (C) 10 mM -0.4 -0.3 +0.9 +1.3 +0.2
carbon source Betaine (C) 2.5 mM -0.1 -0.6 +0.9 +1.1 +0.4
carbon source D-(+)-Galactosamine (C) 10 mM -0.2 -0.4 +0.9 +1.1 +0.5
carbon source L-Lysine (C) 10 mM -0.2 -0.3 +0.9 +1.2 +0.4
carbon source Quinic Acid (C) 10 mM -0.2 -0.2 +1.0 +1.2 +0.4
carbon source Xanthosine (C) 10 mM -0.3 -0.2 +1.0 +1.1 +0.6
carbon source Uridine (C) 10 mM +0.2 -0.9 +1.1 +1.4 +0.5
remove
PFR28_03103
plot		 remove
PFR28_03104
plot		 remove
PFR28_03105		 remove
PFR28_03106
plot		 remove
PFR28_03107
plot