Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_03068 and PFR28_03069 are separated by 62 nucleotidesPFR28_03069 and PFR28_03070 are separated by 129 nucleotidesPFR28_03070 and PFR28_03071 overlap by 4 nucleotidesPFR28_03071 and PFR28_03072 are separated by 228 nucleotides PFR28_03068: PFR28_03068 - Putative transport protein YdiK, at 3,567,752 to 3,568,789 _03068 PFR28_03069: PFR28_03069 - hypothetical protein, at 3,568,852 to 3,569,670 _03069 PFR28_03070: PFR28_03070 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 3,569,800 to 3,570,651 _03070 PFR28_03071: PFR28_03071 - hypothetical protein, at 3,570,648 to 3,571,442 _03071 PFR28_03072: PFR28_03072 - hypothetical protein, at 3,571,671 to 3,574,685 _03072
Group Condition PFR28_03068 PFR28_03069 PFR28_03070 PFR28_03071 PFR28_03072
carbon source L-Lactate (C) 10 mM -0.1 +0.1 -0.9 -0.6 +0.0
carbon source butyrate (C) +0.0 -0.3 -0.6 -0.2 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 -0.2 -0.6 -0.3 -0.0
carbon source methyl-trans-p-coumarate (C) -0.2 -0.1 -0.7 -0.1 +0.0
carbon source Guanosine (C) +0.2 -0.3 -0.8 -0.2 -0.0
carbon source L-Hydroxyproline carbon 10 mM -0.1 +0.1 -0.9 +0.0 -0.1
carbon source Quinic Acid (C) +0.1 -0.1 -0.7 -0.2 -0.0
carbon source D-(+)-Galactosamine (C) 10 mM -0.2 -0.2 -0.4 -0.2 +0.1
carbon source Cytidine (C) +0.2 -0.1 -1.1 +0.1 -0.1
carbon source butyrate (C) +0.1 +0.0 -0.8 -0.3 -0.0
carbon source L-Lactate (C) 10 mM -0.6 -0.1 -0.0 -0.2 +0.2
carbon source D-Ribose (C) 10 mM -0.2 -0.1 -0.5 +0.2 -0.1
carbon source L-Lysine (C) 10 mM -0.4 +0.2 -0.3 -0.1 +0.1
carbon source L-Hydroxyproline carbon 10 mM -0.2 +0.3 -0.5 -0.0 -0.1
carbon source L-Leucine (C) 10 mM -0.2 +0.2 -0.4 -0.2 +0.1
stress D-Glucose (C); with Chloride 400 mM -0.3 -0.1 +0.3 -0.1 -0.2
carbon source D,L-Malic Acid (C) +0.1 -0.1 +0.3 -0.5 -0.1
carbon source Shikimic Acid (C) 10 mM +0.2 -0.3 +0.3 -0.2 -0.1
carbon source D-Ribose carbon 10 mM +0.2 +0.2 -0.6 +0.2 -0.0
carbon source Glycocyamine 10 mM (C) -0.1 -0.4 +0.3 +0.2 -0.1
carbon source methyl ferulate (C) -0.2 +0.2 +0.4 -0.2 +0.0
carbon source Inosine carbon 10 mM +0.4 +0.2 -0.3 -0.1 +0.1
carbon source acetate carbon 10 mM +0.4 -0.3 +0.3 -0.1 +0.0
carbon source Vanillic Acid (C) 2.5 mM -0.3 -0.1 +0.7 +0.1 -0.0
carbon source Malonic (C) 10 mM +0.3 -0.2 +0.3 -0.1 +0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.1 +0.2 +0.4 -0.2 -0.1
carbon source butyrate (C) 10 mM -0.2 +0.1 +0.5 +0.2 -0.1
carbon source Guanosine (C) +0.4 -0.2 +0.7 -0.3 -0.1
carbon source Inosine carbon 10 mM +0.4 +0.4 +0.3 -0.1 -0.1
carbon source Glycocyamine 20 mM (C) -0.0 -0.0 +0.8 +0.1 +0.1
remove
PFR28_03068
plot		 remove
PFR28_03069
plot		 remove
PFR28_03070		 remove
PFR28_03071
plot		 remove
PFR28_03072
plot