Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02971 and PFR28_02972 are separated by 146 nucleotidesPFR28_02972 and PFR28_02973 are separated by 32 nucleotidesPFR28_02973 and PFR28_02974 are separated by 199 nucleotidesPFR28_02974 and PFR28_02975 overlap by 4 nucleotides PFR28_02971: PFR28_02971 - hypothetical protein, at 3,476,643 to 3,476,897 _02971 PFR28_02972: PFR28_02972 - hypothetical protein, at 3,477,044 to 3,477,583 _02972 PFR28_02973: PFR28_02973 - HTH-type transcriptional regulator NorG, at 3,477,616 to 3,479,058 _02973 PFR28_02974: PFR28_02974 - Peptidoglycan-associated lipoprotein, at 3,479,258 to 3,480,067 _02974 PFR28_02975: PFR28_02975 - hypothetical protein, at 3,480,064 to 3,480,423 _02975
Group Condition PFR28_02971 PFR28_02972 PFR28_02973 PFR28_02974 PFR28_02975
carbon source L-Valine (C) 10 mM N.D. -0.5 -3.4 -0.0 -1.3
carbon source L-Valine (C) 10 mM N.D. -0.3 -3.0 -0.1 -0.8
carbon source Vanillic Acid (C) 2.5 mM N.D. -0.2 -0.3 -1.0 -2.7
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. +0.1 -0.1 -1.4 -2.3
carbon source p-Coumaric (C) 2.5 mM N.D. -0.2 -0.9 -1.0 -1.4
carbon source L-Valine (C) 10 mM N.D. -0.3 -3.1 +0.2 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM N.D. -0.1 -3.3 +0.1 -0.0
carbon source caffeic (C) 2.5 mM N.D. +0.1 -0.3 -1.9 -1.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. -0.1 -0.0 -1.4 -1.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM N.D. -0.1 -3.3 +0.2 +0.1
carbon source L-Valine (C) 10 mM N.D. -0.2 -2.0 -0.2 -0.4
carbon source p-Coumaric (C) 2.5 mM N.D. -0.0 -0.8 -1.0 -1.0
carbon source L-Valine (C) 10 mM N.D. -0.2 -2.1 -0.4 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. -0.6 -0.4 -1.1 -0.7
carbon source caffeic (C) 2.5 mM N.D. -0.2 -0.4 -1.1 -0.9
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. -0.1 -0.0 -1.5 -1.0
carbon source p-Coumaric (C) 2.5 mM N.D. -0.0 -0.8 -1.0 -0.8
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM N.D. -0.1 -2.6 +0.2 -0.1
carbon source Ferulic Acid (C) 2.5 mM N.D. -0.1 -0.5 -0.6 -1.2
carbon source L-Isoleucine (C) 10 mM N.D. -0.2 -1.7 -0.1 -0.4
carbon source L-tyrosine 5 mM (C) N.D. -0.2 -0.6 -0.8 -0.9
carbon source Vanillic Acid (C) 2.5 mM N.D. -0.4 -0.5 -0.8 -0.7
carbon source propionate carbon 20 mM N.D. +0.1 -0.1 -0.8 -1.4
carbon source butyrate (C) 10 mM N.D. -0.0 -0.6 +0.6 -2.1
carbon source L-Isoleucine (C) 10 mM N.D. -0.2 -1.8 -0.2 +0.3
carbon source methyl-trans-p-coumarate (C) N.D. +0.0 +1.0 -0.6 -1.9
carbon source methyl-trans-p-coumarate (C) N.D. +0.1 +0.8 -1.3 -1.0
carbon source Guanosine (C) N.D. +0.7 +0.1 -0.2 -1.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM N.D. -0.1 -1.4 +0.5 +0.3
carbon source methyl-trans-p-coumarate (C) N.D. -0.1 +0.8 -1.4 +0.9
remove
PFR28_02971
plot		 remove
PFR28_02972
plot		 remove
PFR28_02973		 remove
PFR28_02974
plot		 remove
PFR28_02975
plot