Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02857 and PFR28_02858 are separated by 245 nucleotidesPFR28_02858 and PFR28_02859 are separated by 51 nucleotidesPFR28_02859 and PFR28_02860 are separated by 211 nucleotidesPFR28_02860 and PFR28_02861 are separated by 239 nucleotides PFR28_02857: PFR28_02857 - Fe(3+) dicitrate transport protein FecA, at 3,331,500 to 3,333,938 _02857 PFR28_02858: PFR28_02858 - hypothetical protein, at 3,334,184 to 3,335,188 _02858 PFR28_02859: PFR28_02859 - putative RNA polymerase sigma factor FecI, at 3,335,240 to 3,335,740 _02859 PFR28_02860: PFR28_02860 - hypothetical protein, at 3,335,952 to 3,336,392 _02860 PFR28_02861: PFR28_02861 - hypothetical protein, at 3,336,632 to 3,338,074 _02861
Group Condition PFR28_02857 PFR28_02858 PFR28_02859 PFR28_02860 PFR28_02861
carbon source L-Lactate (C) 10 mM -0.1 +0.1 -0.3 N.D. -0.9
carbon source L-Lysine (C) 10 mM -0.1 -0.1 -0.5 N.D. -0.4
carbon source D,L-Malic Acid (C) -0.0 -0.1 -0.8 N.D. -0.2
carbon source butyrate (C) 10 mM -0.2 +0.2 -0.7 N.D. -0.2
carbon source D,L-Malic Acid (C) 10 mM -0.0 -0.1 -0.4 N.D. -0.5
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.0 +0.3 +0.2 N.D. -1.4
stress D-Glucose (C); with Chloride 400 mM -0.1 +0.3 -0.7 N.D. -0.4
carbon source Xanthosine (C) +0.1 +0.1 -0.1 N.D. -0.9
carbon source succinate (C) -0.1 +0.1 -0.4 N.D. -0.5
carbon source Inosine (C) -0.0 +0.1 -0.2 N.D. -0.6
carbon source Glycocyamine 20 mM (C) -0.0 +0.4 -0.3 N.D. -0.8
carbon source methyl ferulate (C) -0.0 +0.1 -0.4 N.D. -0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.3 +0.3 N.D. -0.3
carbon source Choline chloride (C) -0.1 +0.3 -0.3 N.D. -0.2
carbon source propionate carbon 20 mM +0.0 -0.3 +0.4 N.D. -0.4
carbon source D,L-Lactate carbon 20 mM +0.1 -0.2 +0.3 N.D. -0.4
carbon source Inosine carbon 10 mM -0.1 +0.1 -0.4 N.D. +0.4
carbon source butyrate (C) +0.0 +0.4 -0.2 N.D. -0.4
carbon source Guanosine (C) +0.1 +0.6 -0.3 N.D. -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM +0.0 -0.1 -0.4 N.D. +0.5
carbon source Vanillic Acid (C) 2.5 mM +0.2 -0.1 +0.3 N.D. -0.4
carbon source L-Phenylalanine carbon 5 mM +0.0 -0.2 +0.6 N.D. -0.2
carbon source Glycocyamine 10 mM (C) +0.1 -0.4 +0.2 N.D. +0.5
carbon source butyrate (C) +0.0 +0.4 +0.4 N.D. -0.4
carbon source methyl ferulate (C) +0.1 +0.3 -0.3 N.D. +0.5
carbon source Xanthosine (C) +0.2 +0.5 -0.2 N.D. +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.1 +0.4 +0.8 N.D. -0.4
carbon source Glycocyamine 20 mM (C) +0.1 +0.2 -0.0 N.D. +0.6
carbon source D(+)-Glucuronic carbon 10 mM +0.1 +0.1 +0.6 N.D. +0.2
carbon source Inosine carbon 10 mM +0.0 +0.5 +0.2 N.D. +0.7
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