Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02853 and PFR28_02854 are separated by 13 nucleotidesPFR28_02854 and PFR28_02855 are separated by 88 nucleotidesPFR28_02855 and PFR28_02856 are separated by 207 nucleotidesPFR28_02856 and PFR28_02857 are separated by 21 nucleotides PFR28_02853: PFR28_02853 - Cytosine permease, at 3,326,506 to 3,327,777 _02853 PFR28_02854: PFR28_02854 - Cytosine deaminase, at 3,327,791 to 3,329,038 _02854 PFR28_02855: PFR28_02855 - Diaminopimelate epimerase, at 3,329,127 to 3,330,119 _02855 PFR28_02856: PFR28_02856 - Inner membrane protein YbjJ, at 3,330,327 to 3,331,478 _02856 PFR28_02857: PFR28_02857 - Fe(3+) dicitrate transport protein FecA, at 3,331,500 to 3,333,938 _02857
Group Condition PFR28_02853 PFR28_02854 PFR28_02855 PFR28_02856 PFR28_02857
carbon source butyrate (C) 10 mM +0.1 -0.6 -2.0 +0.2 -0.2
carbon source m-Inositol carbon 10 mM +0.0 -0.0 -1.7 -0.1 +0.0
carbon source Inosine (C) -0.0 -0.1 -1.4 -0.2 +0.0
carbon source L-Malic (C) -0.0 -0.3 -1.3 +0.0 -0.1
carbon source L-Lysine (C) 10 mM +0.1 -0.2 -1.0 -0.4 -0.1
carbon source D-Ribose (C) 10 mM +0.2 +0.1 -1.7 -0.2 -0.0
carbon source Cytidine (C) +0.0 -0.0 -1.3 -0.2 -0.0
carbon source D-Trehalose (C) 5 mM -0.1 +0.3 -1.3 -0.4 -0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 -0.3 -1.9 +0.5 +0.2
carbon source sn-glycero-3-phosphocholine (C) +0.0 -0.2 -1.3 +0.1 -0.1
carbon source D-Glucuronic (C) 10 mM +0.1 +0.0 -1.0 -0.3 +0.0
carbon source L-Arginine (C) 10 mM +0.0 +0.1 -0.9 -0.3 -0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.5 -0.7 +0.2 -0.1
carbon source 4-Guanidinobutyric (C) +0.2 -0.2 -0.8 -0.2 -0.1
carbon source NAG (C) 10 mM -0.1 +0.1 -1.1 +0.0 +0.0
carbon source L-Hydroxyproline (C) 10 mM +0.0 +0.1 -0.8 -0.3 -0.0
carbon source D-Ribose carbon 10 mM +0.2 +0.2 -1.3 +0.0 -0.0
carbon source butyrate (C) +0.1 +0.3 -1.6 +0.4 +0.0
carbon source L-Lactate (C) 10 mM -0.1 -0.5 +0.6 -0.5 -0.2
carbon source Glycerol (C) 20 mM +0.2 +0.2 -0.7 -0.3 +0.0
carbon source Betaine (C) 2.5 mM -0.2 +0.0 +0.7 -0.3 -0.1
carbon source Vanillic Acid (C) 2.5 mM +0.1 +0.3 -0.7 +0.2 +0.2
carbon source L-Leucine (C) 10 mM -0.3 -0.1 +0.8 -0.2 -0.1
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.0 +0.1 +0.9 -0.5 +0.0
carbon source Inosine (C) +0.0 -0.2 +0.9 -0.2 +0.1
carbon source L-tyrosine (C) 10 mM +0.1 +0.2 +0.6 -0.3 -0.0
carbon source butyrate (C) +0.3 -0.4 +0.5 +0.2 -0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 -0.3 +1.0 +0.3 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.2 +0.4 +0.5 +0.3 +0.1
carbon source Betaine (C) +0.5 +0.2 +1.1 +0.3 +0.1
remove
PFR28_02853
plot		 remove
PFR28_02854
plot		 remove
PFR28_02855		 remove
PFR28_02856
plot		 remove
PFR28_02857
plot