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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_02807 and PFR28_02808 are separated by 58 nucleotides
PFR28_02808 and PFR28_02809 are separated by 168 nucleotides
PFR28_02809 and PFR28_02810 overlap by 4 nucleotides
PFR28_02810 and PFR28_02811 are separated by 52 nucleotides
PFR28_02807: PFR28_02807 - tRNA-Asp, at 3,280,656 to 3,280,732
_02807
PFR28_02808: PFR28_02808 - tRNA-Val, at 3,280,791 to 3,280,866
_02808
PFR28_02809: PFR28_02809 - Glucose 1-dehydrogenase 1, at 3,281,035 to 3,281,790
_02809
PFR28_02810: PFR28_02810 - O-succinylhomoserine sulfhydrylase, at 3,281,787 to 3,282,998
_02810
PFR28_02811: PFR28_02811 - Amidophosphoribosyltransferase, at 3,283,051 to 3,284,556
_02811
Group
Condition
PFR28
_02807
PFR28
_02808
PFR28
_02809
PFR28
_02810
PFR28
_02811
carbon source
4-Guanidinobutyric (C) 10 mM
N.D.
N.D.
-0.1
-5.1
-4.6
carbon source
L-Proline carbon 10 mM
N.D.
N.D.
-0.5
-5.2
-3.8
carbon source
sn-glycero-3-phosphocholine (C)
N.D.
N.D.
-0.8
-5.0
-3.6
carbon source
Shikimic Acid carbon 10 mM
N.D.
N.D.
+0.1
-5.3
-4.2
carbon source
propionate carbon 20 mM
N.D.
N.D.
+0.0
-5.2
-4.1
carbon source
L-Arginine (C) 10 mM
N.D.
N.D.
-0.1
-4.2
-5.0
carbon source
D-Galacturonic Acid (C) 10 mM
N.D.
N.D.
+0.5
-4.7
-4.9
carbon source
D-Mannose carbon 10 mM
N.D.
N.D.
+0.2
-5.4
-3.8
carbon source
propionate carbon 20 mM
N.D.
N.D.
+0.2
-5.0
-4.2
carbon source
4-Guanidinobutyric (C)
N.D.
N.D.
-0.2
-5.2
-3.5
carbon source
Shikimic Acid carbon 10 mM
N.D.
N.D.
+0.3
-5.3
-3.8
carbon source
L-Valine (C) 10 mM
N.D.
N.D.
+0.2
-4.1
-4.7
carbon source
4-Guanidinobutyric (C) 10 mM
N.D.
N.D.
+0.5
-4.8
-4.3
carbon source
Shikimic Acid carbon 10 mM
N.D.
N.D.
+0.7
-5.2
-4.0
carbon source
4-Guanidinobutyric (C) 10 mM
N.D.
N.D.
+0.5
-4.8
-4.2
carbon source
a-Ketoglutaric carbon 10 mM
N.D.
N.D.
+0.5
-4.3
-4.6
carbon source
NAG carbon 10 mM
N.D.
N.D.
+0.2
-4.8
-3.9
carbon source
Guanosine carbon 10 mM
N.D.
N.D.
+0.3
-4.6
-4.1
carbon source
propionate carbon 20 mM
N.D.
N.D.
+0.5
-5.0
-3.9
carbon source
Fumarate (C) 20 mM
N.D.
N.D.
+0.4
-3.9
-4.7
carbon source
Choline (C) 10 mM
N.D.
N.D.
+0.4
-4.2
-4.4
carbon source
Fumarate (C) 20 mM
N.D.
N.D.
+0.4
-3.6
-4.9
carbon source
L-Arginine (C) 10 mM
N.D.
N.D.
+0.5
-3.5
-5.1
carbon source
D,L-Lactate carbon 20 mM
N.D.
N.D.
+0.5
-4.4
-4.1
carbon source
gluconate carbon 10 mM
N.D.
N.D.
+0.6
-3.8
-4.5
carbon source
D,L-Lactate carbon 20 mM
N.D.
N.D.
+0.6
-4.6
-3.7
carbon source
Malonic (C) 10 mM
N.D.
N.D.
+0.9
-3.6
-4.8
carbon source
trans-aconitic (C) 5 mM
N.D.
N.D.
+0.9
-4.5
-3.9
carbon source
Citric Acid (C) 10 mM
N.D.
N.D.
+0.7
-3.6
-4.5
carbon source
Betaine (C) 2.5 mM
N.D.
N.D.
+0.8
-3.8
-4.3
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