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Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_02755 and PFR28_02756 are separated by 189 nucleotides
PFR28_02756 and PFR28_02757 are separated by 1976 nucleotides
PFR28_02757 and PFR28_02758 are separated by 118 nucleotides
PFR28_02758 and PFR28_02759 overlap by 1 nucleotides
PFR28_02755: PFR28_02755 - hypothetical protein, at 3,224,645 to 3,225,979
_02755
PFR28_02756: PFR28_02756 - Carboxypeptidase G2, at 3,226,169 to 3,227,407
_02756
PFR28_02757: PFR28_02757 - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase, at 3,229,384 to 3,230,313
_02757
PFR28_02758: PFR28_02758 - putative FAD-linked oxidoreductase, at 3,230,432 to 3,231,931
_02758
PFR28_02759: PFR28_02759 - hypothetical protein, at 3,231,931 to 3,232,989
_02759
Group
Condition
PFR28
_02755
PFR28
_02756
PFR28
_02757
PFR28
_02758
PFR28
_02759
carbon source
butyrate (C) 10 mM
-0.3
+0.0
-0.4
-0.1
-2.6
carbon source
Vanillic Acid (C) 2.5 mM
-0.1
-0.4
-0.1
-0.4
-0.6
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct
-0.1
-0.2
-0.0
-0.5
-0.7
carbon source
L-Phenylalanine carbon 5 mM
+0.1
-0.3
+0.0
-0.4
-0.8
carbon source
L-Carnitine (C)
-0.1
-0.2
-0.0
-0.1
-0.7
carbon source
L-Carnitine (C)
-0.2
-0.2
-0.2
-0.6
-0.0
carbon source
acetate (C) 30 mM
-0.0
-0.3
+0.0
-0.2
-0.6
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.1
-0.3
-0.3
+0.0
-0.5
carbon source
octanoate (C)
-0.1
-0.5
-0.2
-0.0
-0.4
carbon source
Guanosine (C)
-0.1
-0.2
+0.1
-0.3
-0.5
carbon source
Glycocyamine 20 mM (C)
+0.0
-0.1
+0.0
+0.0
-1.0
carbon source
p-Coumaric (C)
-0.0
-0.0
-0.1
+0.1
-0.9
carbon source
Guanosine carbon 10 mM
-0.1
+0.1
+0.1
-0.1
-0.9
carbon source
Inosine carbon 10 mM
+0.1
+0.4
+0.1
-0.6
-0.7
carbon source
pyruvate carbon 10 mM
+0.1
+0.2
-0.1
-0.2
-0.7
carbon source
D(+)-Glucuronic carbon 10 mM
-0.0
+0.2
-0.1
-0.4
-0.4
carbon source
methyl-trans-p-coumarate (C)
+0.0
+0.2
-0.4
-0.1
-0.4
carbon source
Azelaic carbon 10 mM
+0.1
+0.1
-0.3
-0.3
-0.3
carbon source
Vanillic Acid (C) 2.5 mM
-0.1
-0.0
-0.0
-0.7
+0.5
carbon source
D(+)-Glucuronic carbon 10 mM
+0.1
+0.3
-0.2
-0.3
-0.2
carbon source
Guanosine (C)
-0.3
+0.1
+0.3
+0.1
-0.5
carbon source
Xanthosine (C) 10 mM
+0.0
+0.3
+0.1
-0.1
-0.5
carbon source
sn-glycero-3-phosphocholine (C)
+0.0
-0.4
-0.1
-0.4
+0.8
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.0
-0.0
-0.3
-0.6
+0.8
carbon source
L-Lactate (C) 10 mM
+0.1
+0.3
-0.3
+0.2
-0.3
carbon source
octanoate (C)
+0.2
-0.2
-0.2
-0.3
+0.6
carbon source
D,L-Malic Acid (C) 10 mM
-0.1
-0.2
-0.0
+0.2
+0.6
carbon source
Guanosine (C)
-0.0
-0.0
-0.3
+0.2
+0.8
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.0
-0.1
-0.2
-0.0
+1.4
carbon source
L-Lactate (C) 10 mM
+0.1
+0.3
-0.4
+0.3
+0.9
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