Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02703 and PFR28_02704 overlap by 4 nucleotidesPFR28_02704 and PFR28_02705 are separated by 81 nucleotidesPFR28_02705 and PFR28_02706 are separated by 58 nucleotidesPFR28_02706 and PFR28_02707 are separated by 162 nucleotides PFR28_02703: PFR28_02703 - hypothetical protein, at 3,177,778 to 3,178,062 _02703 PFR28_02704: PFR28_02704 - hypothetical protein, at 3,178,059 to 3,178,373 _02704 PFR28_02705: PFR28_02705 - hypothetical protein, at 3,178,455 to 3,178,817 _02705 PFR28_02706: PFR28_02706 - hypothetical protein, at 3,178,876 to 3,180,258 _02706 PFR28_02707: PFR28_02707 - hypothetical protein, at 3,180,421 to 3,181,104 _02707
Group Condition PFR28_02703 PFR28_02704 PFR28_02705 PFR28_02706 PFR28_02707
carbon source Guanosine (C) -5.3 -2.3 -0.3 +0.4 -0.8
carbon source caffeic (C) -1.0 -4.3 -2.8 -0.3 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 -5.6 -0.6 -0.5 -0.3
carbon source Guanosine (C) -0.6 -4.2 -2.1 +0.3 +0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +1.6 -5.6 -0.8 +0.0 -0.9
carbon source Cytidine (C) -4.1 -1.2 +0.4 -0.9 +0.4
carbon source L-Lactate (C) 10 mM -0.8 -3.6 -0.9 -0.2 +0.4
carbon source butyrate (C) 10 mM -1.5 +0.6 -3.4 -0.0 +0.2
carbon source butyrate (C) 10 mM +1.3 -4.1 -0.4 -0.3 -0.5
carbon source D-Xylose carbon 10 mM +0.4 -1.8 -1.6 -0.2 -0.1
carbon source Shikimic Acid (C) 10 mM -0.7 -1.1 -1.4 +0.4 -0.4
carbon source Glycocyamine 20 mM (C) -0.2 -3.1 +0.3 +0.1 -0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.7 -1.7 -1.6 +0.1 -0.0
carbon source octanoate (C) +0.5 -2.9 +0.6 -0.5 -0.1
carbon source L-Lactate (C) +0.6 -3.2 +0.5 -0.3 +0.2
carbon source sn-glycero-3-phosphocholine (C) +0.5 -0.6 -2.9 +0.2 +0.6
carbon source L-tyrosine (C) 10 mM -2.9 +0.4 +0.6 +0.2 -0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +1.1 -0.9 -1.8 +0.5 -0.2
carbon source p-Coumaric (C) 2.5 mM +1.3 -1.1 -1.2 -0.1 +0.2
carbon source Ferulic Acid (C) 2.5 mM +1.6 -1.8 -0.8 -0.1 +0.3
carbon source NAG (C) 10 mM +1.0 +0.2 -1.7 +0.2 -0.7
carbon source L-Lysine (C) 10 mM -3.2 +1.2 +0.7 +0.4 +0.1
carbon source Xanthosine (C) -0.9 +1.3 -1.7 -0.1 +0.7
carbon source Vanillic Acid (C) 2.5 mM +1.8 -3.6 +0.3 +0.3 +0.6
carbon source Vanillic Acid (C) 2.5 mM +1.3 -2.3 +0.7 -0.0 +0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +1.3 -0.4 -1.8 +0.2 +0.4
carbon source propionate carbon 20 mM +1.9 -0.4 -1.0 +0.2 -0.4
carbon source Vanillic Acid (C) 2.5 mM +1.8 -1.3 -0.3 -0.1 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +1.1 +0.1 +1.8 -0.1 -1.3
carbon source Inosine carbon 10 mM +1.7 +0.8 +0.6 -0.1 -0.5
remove
PFR28_02703
plot
remove
PFR28_02704
plot
remove
PFR28_02705
remove
PFR28_02706
plot
remove
PFR28_02707
plot