Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02696 and PFR28_02697 are separated by 11 nucleotidesPFR28_02697 and PFR28_02698 are separated by 446 nucleotidesPFR28_02698 and PFR28_02699 are separated by 44 nucleotidesPFR28_02699 and PFR28_02700 are separated by 399 nucleotides PFR28_02696: PFR28_02696 - hypothetical protein, at 3,172,043 to 3,172,816 _02696 PFR28_02697: PFR28_02697 - hypothetical protein, at 3,172,828 to 3,173,571 _02697 PFR28_02698: PFR28_02698 - HTH-type transcriptional regulator PrtR, at 3,174,018 to 3,174,752 _02698 PFR28_02699: PFR28_02699 - hypothetical protein, at 3,174,797 to 3,175,336 _02699 PFR28_02700: PFR28_02700 - hypothetical protein, at 3,175,736 to 3,176,128 _02700
Group Condition PFR28_02696 PFR28_02697 PFR28_02698 PFR28_02699 PFR28_02700
carbon source L-Lactate (C) 10 mM -0.2 -0.6 N.D. -0.1 -0.6
carbon source butyrate (C) 10 mM +0.3 -2.2 N.D. +0.1 +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 -0.5 N.D. -0.6 +0.0
carbon source propionate carbon 20 mM +0.1 -0.6 N.D. -0.3 -0.2
carbon source L-Valine (C) 10 mM -0.3 -0.2 N.D. +0.2 -0.5
carbon source Inosine (C) -0.4 -0.6 N.D. -0.1 +0.2
carbon source Xanthosine (C) -0.3 -0.4 N.D. +0.3 -0.3
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.2 +0.6 N.D. -0.2 -1.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.1 -0.6 N.D. +0.3 -0.2
carbon source methyl ferulate (C) -0.1 +0.2 N.D. +0.3 -0.8
carbon source methyl ferulate (C) -0.4 +0.3 N.D. +0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.5 +0.6 N.D. -0.2 -0.0
carbon source L-Lysine (C) 10 mM -0.2 +0.4 N.D. +0.2 -0.5
carbon source octanoate (C) +0.3 -0.6 N.D. -0.2 +0.4
carbon source NAG carbon 10 mM +0.3 +0.6 N.D. -0.2 -0.6
carbon source m-Inositol carbon 10 mM +0.2 +0.5 N.D. -0.3 -0.3
carbon source methyl-trans-p-coumarate (C) -0.3 +0.5 N.D. -0.3 +0.6
carbon source 4-Guanidinobutyric (C) -0.4 +0.3 N.D. +0.4 +0.2
carbon source butyrate (C) 10 mM -0.6 +0.3 N.D. +0.4 +0.4
carbon source L-Phenylalanine carbon 5 mM +0.1 +0.7 N.D. -0.1 -0.2
carbon source L-Lactate (C) -0.2 -0.2 N.D. +0.5 +0.4
carbon source Guanosine (C) -0.2 +0.9 N.D. +0.1 +0.1
carbon source pyruvate (C) +0.1 -0.1 N.D. +0.4 +0.6
carbon source Guanosine (C) +0.3 -0.3 N.D. +0.1 +1.1
carbon source caffeic (C) +0.1 +0.6 N.D. +0.3 +0.2
carbon source Betaine (C) +0.1 +0.2 N.D. +0.4 +0.5
carbon source sn-glycero-3-phosphocholine (C) +0.3 +0.7 N.D. +0.1 +0.1
carbon source D-Glucosamine Hydrochloride carbon 10 mM +1.4 +0.1 N.D. -0.1 -0.0
carbon source D-Glucosamine Hydrochloride carbon 10 mM +1.3 +0.4 N.D. +0.0 -0.2
carbon source D-Glucosamine Hydrochloride carbon 10 mM +2.0 +0.7 N.D. -0.1 -0.0
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PFR28_02696
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