Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02604 and PFR28_02605 are separated by 15 nucleotidesPFR28_02605 and PFR28_02606 overlap by 4 nucleotidesPFR28_02606 and PFR28_02607 are separated by 182 nucleotidesPFR28_02607 and PFR28_02608 are separated by 63 nucleotides PFR28_02604: PFR28_02604 - Serine--tRNA ligase, at 3,078,415 to 3,079,695 _02604 PFR28_02605: PFR28_02605 - Putative fluoride ion transporter CrcB, at 3,079,711 to 3,080,085 _02605 PFR28_02606: PFR28_02606 - Replication-associated recombination protein A, at 3,080,082 to 3,081,407 _02606 PFR28_02607: PFR28_02607 - Outer-membrane lipoprotein carrier protein, at 3,081,590 to 3,082,213 _02607 PFR28_02608: PFR28_02608 - DNA translocase FtsK, at 3,082,277 to 3,084,601 _02608
Group Condition PFR28_02604 PFR28_02605 PFR28_02606 PFR28_02607 PFR28_02608
carbon source L-Malic (C) 10 mM N.D. -0.1 -0.1 N.D. -5.0
carbon source L-Carnitine (C) 10 mM N.D. -0.2 -0.1 N.D. -4.9
carbon source D,L-Malic Acid (C) 10 mM N.D. -0.0 -0.1 N.D. -4.9
carbon source Betaine (C) 2.5 mM N.D. +0.2 -0.0 N.D. -5.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. -3.5 -0.7 N.D. -0.5
carbon source Quinic Acid (C) 10 mM N.D. +0.2 -0.0 N.D. -4.7
carbon source D-(+)-Galactosamine (C) 10 mM N.D. -0.1 +0.1 N.D. -4.6
carbon source L-Leucine (C) 10 mM N.D. -0.3 -0.1 N.D. -4.1
carbon source octanoate (C) 10 mM N.D. +0.1 -0.1 N.D. -4.3
carbon source L-Lactate (C) 10 mM N.D. -0.2 +0.1 N.D. -4.1
carbon source L-Arginine (C) 10 mM N.D. +0.1 -0.3 N.D. -4.0
carbon source butyrate (C) 10 mM N.D. +0.2 -0.2 N.D. -4.1
carbon source Uridine (C) 10 mM N.D. -0.1 -0.1 N.D. -3.8
carbon source L-Valine (C) 10 mM N.D. +0.3 -0.0 N.D. -4.2
carbon source sn-glycero-3-phosphocholine (C) 10 mM N.D. +0.1 -0.1 N.D. -3.9
carbon source NAG carbon 10 mM N.D. -0.1 +0.2 N.D. -3.9
carbon source caffeic (C) 2.5 mM N.D. +0.3 +0.1 N.D. -4.3
carbon source sn-glycero-3-phosphocholine (C) 10 mM N.D. -0.1 -0.1 N.D. -3.6
carbon source Ferulic Acid (C) 2.5 mM N.D. +0.3 -0.5 N.D. -3.6
carbon source L-Leucine (C) 10 mM N.D. -0.1 -0.1 N.D. -3.6
carbon source Uridine (C) 10 mM N.D. +0.1 -0.0 N.D. -3.8
carbon source Glycerol carbon 20 mM N.D. -0.1 +0.2 N.D. -3.9
carbon source D-(+)-Galactosamine (C) 10 mM N.D. +0.1 +0.1 N.D. -3.8
carbon source Guanosine (C) N.D. -2.0 +0.4 N.D. -1.9
carbon source Adenosine (C) 10 mM N.D. +0.2 +0.1 N.D. -3.8
carbon source Quinic Acid (C) 10 mM N.D. +0.2 +0.0 N.D. -3.6
carbon source caffeic (C) 2.5 mM N.D. +0.2 -0.0 N.D. -3.6
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. +0.6 -0.1 N.D. -3.8
carbon source Betaine (C) 2.5 mM N.D. +0.3 -0.0 N.D. -3.5
carbon source D-(+)-Galactosamine (C) 10 mM N.D. +0.1 +0.3 N.D. -3.5
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