Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02602 and PFR28_02603 are separated by 68 nucleotidesPFR28_02603 and PFR28_02604 are separated by 0 nucleotidesPFR28_02604 and PFR28_02605 are separated by 15 nucleotidesPFR28_02605 and PFR28_02606 overlap by 4 nucleotides PFR28_02602: PFR28_02602 - Glutathionyl-hydroquinone reductase YqjG, at 3,075,947 to 3,076,951 _02602 PFR28_02603: PFR28_02603 - Siroheme synthase, at 3,077,020 to 3,078,414 _02603 PFR28_02604: PFR28_02604 - Serine--tRNA ligase, at 3,078,415 to 3,079,695 _02604 PFR28_02605: PFR28_02605 - Putative fluoride ion transporter CrcB, at 3,079,711 to 3,080,085 _02605 PFR28_02606: PFR28_02606 - Replication-associated recombination protein A, at 3,080,082 to 3,081,407 _02606
Group Condition PFR28_02602 PFR28_02603 PFR28_02604 PFR28_02605 PFR28_02606
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 -3.3 N.D. -3.5 -0.7
carbon source Citric Acid (C) 10 mM -0.1 -5.3 N.D. -0.1 -0.0
carbon source L-Leucine (C) 10 mM +0.1 -5.1 N.D. -0.1 -0.1
carbon source 4-Guanidinobutyric (C) 10 mM -0.0 -5.5 N.D. +0.1 +0.2
carbon source L-Arginine (C) 10 mM -0.0 -4.9 N.D. +0.1 -0.3
carbon source L-tyrosine (C) 10 mM +0.1 -5.3 N.D. -0.0 +0.1
carbon source Citric Acid (C) 10 mM +0.1 -5.0 N.D. -0.0 +0.1
carbon source D,L-Malic Acid (C) -0.2 -4.3 N.D. -0.4 -0.0
carbon source L-Malic (C) -0.1 -4.7 N.D. +0.0 -0.1
carbon source 5-Aminovaleric carbon 10 mM -0.0 -4.5 N.D. -0.4 +0.1
carbon source D,L-Malic Acid (C) 10 mM -0.1 -5.0 N.D. +0.4 +0.0
carbon source Betaine (C) 2.5 mM -0.1 -4.5 N.D. -0.0 -0.1
carbon source 5-Aminovaleric carbon 10 mM -0.0 -4.6 N.D. -0.1 +0.1
carbon source Choline (C) 10 mM +0.0 -4.3 N.D. -0.3 +0.0
carbon source Fumarate (C) 20 mM -0.0 -4.6 N.D. +0.1 -0.1
carbon source 4-Guanidinobutyric (C) 10 mM +0.1 -4.7 N.D. +0.1 -0.0
carbon source Shikimic Acid carbon 10 mM +0.1 -4.8 N.D. -0.1 +0.1
carbon source Shikimic Acid carbon 10 mM +0.2 -4.6 N.D. +0.0 -0.2
carbon source L-Lactate (C) 10 mM +0.2 -4.6 N.D. -0.2 +0.1
carbon source Choline (C) 10 mM +0.1 -4.8 N.D. +0.1 +0.1
carbon source L-Lactate (C) 10 mM +0.1 -4.5 N.D. -0.0 -0.1
carbon source propionate carbon 20 mM +0.1 -4.8 N.D. +0.1 +0.2
carbon source Shikimic Acid (C) 10 mM -0.1 -4.3 N.D. +0.3 -0.4
carbon source acetate carbon 10 mM +0.0 -4.5 N.D. +0.2 -0.1
carbon source Guanosine (C) +0.1 -2.8 N.D. -2.0 +0.4
carbon source sn-glycero-3-phosphocholine (C) -0.0 -4.4 N.D. -0.1 +0.2
carbon source D-Galactose (C) 10 mM +0.1 -4.3 N.D. +0.2 -0.1
carbon source Quinic Acid (C) 10 mM +0.1 -4.4 N.D. +0.2 -0.0
carbon source L-Arabinose (C) 10 mM +0.1 -4.6 N.D. +0.2 +0.1
carbon source Malonic (C) 10 mM +0.2 -4.1 N.D. +0.2 +0.3
remove
PFR28_02602
plot		 remove
PFR28_02603
plot		 remove
PFR28_02604		 remove
PFR28_02605
plot		 remove
PFR28_02606
plot