Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02588 and PFR28_02589 are separated by 95 nucleotidesPFR28_02589 and PFR28_02590 are separated by 294 nucleotidesPFR28_02590 and PFR28_02591 are separated by 212 nucleotidesPFR28_02591 and PFR28_02592 are separated by 7 nucleotides PFR28_02588: PFR28_02588 - Gluconolactonase, at 3,064,819 to 3,065,904 _02588 PFR28_02589: PFR28_02589 - Sensor histidine kinase RcsC, at 3,066,000 to 3,067,130 _02589 PFR28_02590: PFR28_02590 - hypothetical protein, at 3,067,425 to 3,068,384 _02590 PFR28_02591: PFR28_02591 - hypothetical protein, at 3,068,597 to 3,069,457 _02591 PFR28_02592: PFR28_02592 - Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB, at 3,069,465 to 3,069,998 _02592
Group Condition PFR28_02588 PFR28_02589 PFR28_02590 PFR28_02591 PFR28_02592
carbon source propionate carbon 20 mM -0.0 -0.2 -0.7 -0.5 -0.1
carbon source L-Hydroxyproline (C) 10 mM -0.2 +0.2 -1.0 -0.6 +0.2
carbon source Vanillic Acid (C) 2.5 mM +0.2 +0.1 -0.2 -0.5 -0.9
carbon source Xanthosine (C) 10 mM +0.1 -0.8 -0.3 -0.2 -0.2
carbon source L-Phenylalanine carbon 5 mM +0.1 -0.2 -0.2 -0.3 -0.4
carbon source succinate (C) +0.0 -0.2 +0.1 -0.4 -0.7
carbon source L-Leucine (C) 10 mM -0.3 -0.2 -0.5 +0.1 -0.2
carbon source Cytidine carbon 10 mM -0.1 -0.3 +0.2 -0.2 -0.5
carbon source a-Ketoglutaric (C) 10 mM +0.1 -0.3 -0.6 -0.3 +0.1
carbon source L-Isoleucine carbon 10 mM -0.2 +0.1 +0.2 -0.4 -0.5
carbon source L-Phenylalanine carbon 5 mM +0.1 -0.0 -0.7 +0.3 -0.4
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.4 +0.4 -0.5 -0.1
carbon source L-Lactate (C) 10 mM -0.2 +0.7 -0.1 -0.2 -0.9
carbon source D(+)-Glucuronic carbon 10 mM +0.1 -0.3 +0.2 -0.4 -0.4
carbon source L-Hydroxyproline carbon 10 mM +0.2 +0.2 +0.1 -0.3 -0.9
carbon source Guanosine (C) -0.1 +0.2 -0.6 +0.2 -0.1
carbon source L-Malic (C) 10 mM -0.5 +0.3 -0.3 +0.0 +0.5
carbon source Guanosine carbon 10 mM +0.1 +0.1 +0.6 -0.2 -0.4
carbon source caffeic (C) -0.0 +0.3 -0.2 +0.5 -0.3
carbon source caffeic (C) +0.1 -0.3 +0.6 +0.2 -0.3
carbon source caffeic (C) 2.5 mM +0.3 +0.0 +0.4 -0.5 +0.2
carbon source Betaine (C) +0.1 +0.0 -0.0 +0.8 -0.4
carbon source butyrate (C) -0.1 -0.2 -0.2 +0.5 +0.5
carbon source sn-glycero-3-phosphocholine (C) -0.3 +0.3 +0.3 +0.3 +0.2
carbon source Xanthosine (C) +0.1 +0.1 +0.4 +0.5 -0.3
carbon source Guanosine (C) +0.2 -0.7 +0.4 +0.3 +0.8
carbon source L-Valine (C) 10 mM -0.1 +0.3 +0.4 +0.1 +0.4
carbon source L-Lactate (C) 10 mM +0.0 +0.4 +0.3 +0.3 +0.3
carbon source methyl ferulate (C) +0.4 +0.4 +0.1 +0.1 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 -0.0 -0.5 +0.7 +1.0
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