Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02569 and PFR28_02570 are separated by 10 nucleotidesPFR28_02570 and PFR28_02571 are separated by 57 nucleotidesPFR28_02571 and PFR28_02572 are separated by 11 nucleotidesPFR28_02572 and PFR28_02573 are separated by 100 nucleotides PFR28_02569: PFR28_02569 - Glutathione-regulated potassium-efflux system protein KefC, at 3,044,520 to 3,046,346 _02569 PFR28_02570: PFR28_02570 - HTH-type transcriptional regulator CdhR, at 3,046,357 to 3,047,361 _02570 PFR28_02571: PFR28_02571 - hypothetical protein, at 3,047,419 to 3,048,201 _02571 PFR28_02572: PFR28_02572 - Pyridoxine 4-dehydrogenase, at 3,048,213 to 3,049,088 _02572 PFR28_02573: PFR28_02573 - HTH-type transcriptional regulator PgrR, at 3,049,189 to 3,050,094 _02573
Group Condition PFR28_02569 PFR28_02570 PFR28_02571 PFR28_02572 PFR28_02573
carbon source L-Lactate (C) 10 mM -1.0 -0.6 -1.4 -0.5 -0.9
carbon source Glycocyamine 10 mM (C) -0.7 -1.1 -0.1 -0.3 -0.3
carbon source butyrate (C) 10 mM -0.5 -0.3 -2.1 -0.2 +1.1
carbon source Betaine (C) -0.7 -0.8 +0.1 -0.0 -0.4
carbon source L-Lactate (C) 10 mM -0.1 -0.4 -1.1 -0.1 +0.3
carbon source L-Valine (C) 10 mM -0.4 +0.2 -0.9 +0.1 -0.3
carbon source caffeic (C) 2.5 mM -0.7 +0.4 -0.9 +0.1 -0.1
carbon source Cytidine (C) -0.4 +0.2 -1.3 -0.2 +0.5
carbon source Azelaic carbon 10 mM +0.2 -0.5 +0.3 -0.1 -0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.5 -0.0 -0.5 -0.3 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.0 -0.0 +0.6 -0.1 -1.3
carbon source L-pyroglutamic (C) 10 mM +0.6 -0.3 -0.2 +0.2 -0.7
carbon source L-Isoleucine (C) 10 mM -0.1 +0.5 -0.4 +0.3 -0.6
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.4 +0.4 -0.2 -0.1 -0.8
carbon source Guanosine (C) -1.2 -0.2 +0.7 +0.0 +0.3
carbon source butyrate (C) -0.8 +0.1 +0.8 -0.2 -0.1
carbon source butyrate (C) -0.4 -0.4 -0.2 +0.3 +0.6
carbon source L-Phenylalanine carbon 5 mM -0.5 +0.2 +0.7 -0.8 +0.4
carbon source Guanosine (C) +0.1 -0.0 -0.7 -0.2 +0.9
carbon source Xanthosine (C) -0.7 -0.5 +0.4 +0.3 +0.6
carbon source butyrate (C) -0.7 -0.0 +0.4 -0.3 +0.7
carbon source Betaine (C) 2.5 mM +0.3 +0.7 -0.7 -0.4 +0.3
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 +0.3 -0.4 -0.3 +0.8
carbon source Vanillic Acid (C) 2.5 mM -0.7 +0.4 +0.1 -0.2 +0.9
carbon source p-Coumaric (C) -0.6 -0.2 +1.1 +0.3 +0.1
carbon source 4-Guanidinobutyric (C) -0.9 +0.1 +0.9 +0.1 +0.6
carbon source L-Lactate (C) -0.6 +0.2 +0.2 +0.2 +0.9
carbon source Xanthosine (C) 10 mM +0.5 +0.5 -0.4 -0.2 +0.5
carbon source L-Arginine (C) 10 mM +0.6 +0.4 -0.3 -0.0 +0.7
carbon source D-(+)-Galactosamine (C) 10 mM +0.6 +0.6 +0.5 +0.2 -0.3
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