Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02555 and PFR28_02556 are separated by 73 nucleotidesPFR28_02556 and PFR28_02557 are separated by 192 nucleotidesPFR28_02557 and PFR28_02558 are separated by 168 nucleotidesPFR28_02558 and PFR28_02559 are separated by 66 nucleotides PFR28_02555: PFR28_02555 - hypothetical protein, at 3,031,411 to 3,032,118 _02555 PFR28_02556: PFR28_02556 - hypothetical protein, at 3,032,192 to 3,032,992 _02556 PFR28_02557: PFR28_02557 - Non-heme chloroperoxidase, at 3,033,185 to 3,034,138 _02557 PFR28_02558: PFR28_02558 - Sensor histidine kinase RcsC, at 3,034,307 to 3,036,496 _02558 PFR28_02559: PFR28_02559 - hypothetical protein, at 3,036,563 to 3,036,955 _02559
Group Condition PFR28_02555 PFR28_02556 PFR28_02557 PFR28_02558 PFR28_02559
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.2 -0.1 -0.3 +0.3 -1.8
carbon source Betaine (C) -1.1 +0.2 -0.6 +0.1 -0.1
carbon source Cytidine (C) -1.0 -0.4 +0.1 +0.3 -0.6
carbon source butyrate (C) 10 mM -0.7 -0.2 -0.2 +0.1 -0.6
carbon source Guanosine (C) -0.7 -0.8 -0.3 +0.2 +0.3
carbon source propionate (C) 20 mM -0.6 -0.1 -0.0 -0.2 -0.5
carbon source Shikimic Acid (C) 10 mM -0.2 -0.4 +0.2 -0.1 -0.8
carbon source Guanosine (C) -0.3 -0.0 -0.3 +0.1 -0.9
carbon source Glycocyamine 20 mM (C) -0.4 +0.1 -0.2 -0.0 -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.6 -0.3 -0.0 +0.1 -0.3
carbon source Cytidine carbon 10 mM -0.3 +0.1 -0.2 -0.1 -0.7
carbon source Glycocyamine 10 mM (C) -0.4 -0.2 -0.4 +0.1 -0.2
carbon source Betaine (C) 2.5 mM -0.5 -0.6 +0.0 -0.1 +0.3
carbon source p-Coumaric (C) 2.5 mM +0.2 -0.2 +0.1 +0.0 -1.0
carbon source butyrate (C) -0.3 -0.7 -0.2 -0.1 +0.7
carbon source Citric Acid (C) 10 mM -0.3 -0.1 -0.3 -0.2 +0.4
carbon source Vanillic Acid (C) 2.5 mM +0.6 -0.2 -0.0 -0.1 -0.7
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.7 -0.3 -0.1 +0.1 -0.8
carbon source Choline (C) 10 mM -0.3 -0.2 -0.3 -0.1 +0.5
carbon source D-Ribose carbon 10 mM -0.7 +0.3 +0.1 -0.1 +0.3
carbon source caffeic (C) -0.7 +0.1 -0.1 +0.1 +0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 +0.6 +0.0 +0.3 -0.8
carbon source pyruvate (C) -0.1 -0.2 -0.2 -0.2 +0.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.5 +0.8 +0.1 +0.3 -0.4
carbon source sn-glycero-3-phosphocholine (C) +0.5 -0.4 -0.3 +0.1 +0.5
carbon source octanoate (C) -0.3 +0.2 -0.1 -0.1 +0.8
carbon source Glycocyamine 10 mM (C) -0.4 +0.1 -0.0 +0.1 +0.8
carbon source 4-Guanidinobutyric (C) -0.1 +0.2 -0.1 -0.1 +0.8
carbon source methyl ferulate (C) -0.2 +0.3 +0.2 +0.1 +0.5
carbon source Guanosine (C) +0.3 -0.0 +0.0 -0.3 +1.0
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