Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02501 and PFR28_02502 are separated by 60 nucleotidesPFR28_02502 and PFR28_02503 are separated by 184 nucleotidesPFR28_02503 and PFR28_02504 are separated by 257 nucleotidesPFR28_02504 and PFR28_02505 overlap by 16 nucleotides PFR28_02501: PFR28_02501 - hypothetical protein, at 2,975,249 to 2,975,428 _02501 PFR28_02502: PFR28_02502 - hypothetical protein, at 2,975,489 to 2,975,716 _02502 PFR28_02503: PFR28_02503 - hypothetical protein, at 2,975,901 to 2,976,647 _02503 PFR28_02504: PFR28_02504 - NADPH-dependent FMN reductase ArsH, at 2,976,905 to 2,977,600 _02504 PFR28_02505: PFR28_02505 - hypothetical protein, at 2,977,585 to 2,978,118 _02505
Group Condition PFR28_02501 PFR28_02502 PFR28_02503 PFR28_02504 PFR28_02505
carbon source p-Coumaric (C) N.D. N.D. -0.2 -0.2 -0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -0.0 -0.8 +0.0
carbon source sn-glycero-3-phosphocholine (C) N.D. N.D. +0.0 -0.2 -0.7
carbon source Glycocyamine 20 mM (C) N.D. N.D. -0.0 -0.7 -0.0
carbon source butyrate (C) 10 mM N.D. N.D. -0.1 -0.4 -0.3
carbon source L-Lysine (C) 10 mM N.D. N.D. -0.2 -0.5 -0.0
carbon source L-Hydroxyproline (C) 10 mM N.D. N.D. -0.1 +0.1 -0.8
carbon source D-Trehalose (C) 5 mM N.D. N.D. -0.2 -0.5 +0.1
carbon source Guanosine (C) N.D. N.D. +0.0 -0.7 +0.1
carbon source trans-aconitic (C) N.D. N.D. -0.1 -0.5 +0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.0 -0.6 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. N.D. +0.3 -0.2 -0.4
carbon source D-Ribose (C) 10 mM N.D. N.D. -0.1 +0.3 -0.4
carbon source Trisodium citrate (C) 10 mM N.D. N.D. -0.1 +0.4 -0.3
carbon source Glycocyamine 10 mM (C) N.D. N.D. +0.1 +0.3 -0.5
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. +0.1 -0.4 +0.3
carbon source L-Lysine (C) 10 mM N.D. N.D. +0.0 -0.4 +0.3
carbon source D-Mannitol (C) 10 mM N.D. N.D. -0.1 +0.4 -0.2
carbon source L-Leucine (C) 10 mM N.D. N.D. -0.0 -0.3 +0.4
carbon source octanoate (C) N.D. N.D. +0.3 -0.3 +0.2
carbon source Guanosine (C) N.D. N.D. +0.2 -0.2 +0.4
carbon source L-Carnitine (C) 10 mM N.D. N.D. -0.3 +0.1 +0.5
carbon source D-Galactose (C) 10 mM N.D. N.D. -0.2 +0.2 +0.3
carbon source L-Malic (C) 10 mM N.D. N.D. +0.1 -0.2 +0.4
carbon source Betaine (C) N.D. N.D. +0.1 -0.3 +0.5
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. -0.2 +0.2 +0.5
carbon source Inosine carbon 10 mM N.D. N.D. -0.1 +0.4 +0.2
carbon source Trisodium citrate (C) 10 mM N.D. N.D. -0.1 +0.5 +0.2
carbon source NAG (C) 10 mM N.D. N.D. -0.2 +0.5 +0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. +0.2 -0.1 +0.7
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