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Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_02480 and PFR28_02481 are separated by 177 nucleotides
PFR28_02481 and PFR28_02482 are separated by 124 nucleotides
PFR28_02482 and PFR28_02483 are separated by 230 nucleotides
PFR28_02483 and PFR28_02484 are separated by 354 nucleotides
PFR28_02480: PFR28_02480 - Lactoylglutathione lyase, at 2,956,106 to 2,956,627
_02480
PFR28_02481: PFR28_02481 - Alkyl hydroperoxide reductase subunit F, at 2,956,805 to 2,958,367
_02481
PFR28_02482: PFR28_02482 - Alkyl hydroperoxide reductase C, at 2,958,492 to 2,959,055
_02482
PFR28_02483: PFR28_02483 - Glutathione reductase, at 2,959,286 to 2,960,641
_02483
PFR28_02484: PFR28_02484 - UTP--glucose-1-phosphate uridylyltransferase, at 2,960,996 to 2,961,835
_02484
Group
Condition
PFR28
_02480
PFR28
_02481
PFR28
_02482
PFR28
_02483
PFR28
_02484
carbon source
Shikimic Acid carbon 10 mM
+0.0
+0.3
+0.3
-0.9
-6.4
carbon source
Shikimic Acid carbon 10 mM
+0.0
+0.1
+0.2
-0.7
-6.4
carbon source
Shikimic Acid carbon 10 mM
-0.2
+0.2
+0.2
-0.8
-5.8
carbon source
L-Carnitine (C) 10 mM
-0.3
+0.0
+0.2
-0.6
-4.7
carbon source
D-Galacturonic Acid (C) 10 mM
-0.0
-0.0
-0.1
-0.2
-4.5
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-0.0
+0.1
-0.2
-0.4
-4.3
carbon source
D(+)-Glucuronic carbon 10 mM
-0.1
-0.1
+0.0
-0.5
-4.0
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.2
-0.0
-0.1
-0.8
-3.1
carbon source
L-Carnitine (C) 10 mM
+0.1
+0.0
+0.0
-0.7
-3.6
carbon source
methyl ferulate (C)
+0.1
+0.3
-0.2
-0.9
-3.3
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.2
-0.1
+0.1
-0.9
-2.7
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.1
-0.1
+0.3
-0.9
-3.0
carbon source
methyl ferulate (C)
+0.2
-0.1
-0.2
-0.9
-2.5
carbon source
4-Acetoxy-3-methoxycinnamic (C)
-0.2
+0.1
+0.1
-0.6
-2.9
carbon source
acetate carbon 10 mM
-0.0
+0.1
+0.2
+0.4
-3.7
carbon source
acetate carbon 10 mM
-0.2
-0.2
+0.0
+0.4
-2.9
carbon source
caffeic (C)
+0.0
+0.4
+0.8
-0.7
-3.1
carbon source
L-Lactate (C) 10 mM
-0.1
+0.1
+0.3
+0.2
-3.0
carbon source
acetate carbon 10 mM
+0.0
+0.0
+0.2
+0.3
-3.1
carbon source
caffeic (C)
-0.0
+0.5
+0.8
-1.0
-2.5
carbon source
caffeic (C)
+0.1
+0.3
+0.9
-0.9
-2.8
carbon source
Cytidine carbon 10 mM
-0.3
-0.2
+0.1
+0.5
+2.8
carbon source
Cytidine carbon 10 mM
-0.1
-0.2
-0.0
+0.5
+3.0
carbon source
Vanillic Acid (C) 2.5 mM
-0.6
+0.1
-0.2
+0.1
+3.9
carbon source
Vanillic Acid (C) 2.5 mM
-0.6
+0.1
-0.0
+0.2
+3.8
carbon source
Vanillic Acid (C) 2.5 mM
-0.4
+0.3
-0.1
+0.2
+3.8
carbon source
NAG (C) 10 mM
-0.0
-0.1
+0.1
+0.2
+4.5
carbon source
Inosine carbon 10 mM
+0.0
-0.1
+0.0
-0.4
+7.3
carbon source
Inosine carbon 10 mM
+0.0
-0.0
-0.1
-0.0
+7.7
carbon source
Inosine carbon 10 mM
-0.1
-0.1
+0.0
-0.3
+8.3
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