Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02417 and PFR28_02418 are separated by 53 nucleotidesPFR28_02418 and PFR28_02419 are separated by 138 nucleotidesPFR28_02419 and PFR28_02420 are separated by 134 nucleotidesPFR28_02420 and PFR28_02421 are separated by 32 nucleotides PFR28_02417: PFR28_02417 - Xylitol-binding protein, at 2,884,025 to 2,884,951 _02417 PFR28_02418: PFR28_02418 - hypothetical protein, at 2,885,005 to 2,885,157 _02418 PFR28_02419: PFR28_02419 - scyllo-inositol 2-dehydrogenase (NADP(+)) IolW, at 2,885,296 to 2,886,348 _02419 PFR28_02420: PFR28_02420 - Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, at 2,886,483 to 2,887,493 _02420 PFR28_02421: PFR28_02421 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 2,887,526 to 2,889,457 _02421
Group Condition PFR28_02417 PFR28_02418 PFR28_02419 PFR28_02420 PFR28_02421
carbon source m-Inositol (C) 10 mM -6.0 N.D. -0.8 -5.5 -6.1
carbon source m-Inositol (C) 10 mM -6.2 N.D. -0.6 -4.5 -5.3
carbon source m-Inositol carbon 10 mM -5.7 N.D. -0.6 -4.6 -5.6
carbon source m-Inositol carbon 10 mM -5.6 N.D. -0.3 -5.5 -5.0
carbon source m-Inositol (C) 10 mM -5.6 N.D. -0.4 -5.4 -4.9
carbon source m-Inositol carbon 10 mM -3.9 N.D. -0.7 -6.2 -5.3
carbon source D-Glucosamine Hydrochloride (C) 10 mM +0.0 N.D. +0.2 -1.0 -0.7
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.0 N.D. +0.0 -0.0 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 N.D. -0.2 -0.7 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.3 N.D. -0.6 -0.7 -0.1
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 N.D. +0.5 -0.6 -0.7
carbon source D,L-Malic Acid (C) 10 mM -0.4 N.D. -0.3 -0.3 +0.1
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.1 N.D. +0.4 -0.6 -0.7
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 N.D. +0.3 -0.4 -0.6
carbon source butyrate (C) 10 mM -0.3 N.D. +0.1 -0.4 -0.1
carbon source Cytidine carbon 10 mM -0.3 N.D. +0.1 -0.5 -0.0
carbon source D-Glucosamine Hydrochloride carbon 10 mM -0.0 N.D. +0.6 -0.8 -0.5
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.0 N.D. +0.5 -0.4 -0.7
carbon source L-Lactate (C) 10 mM -0.5 N.D. +0.4 -0.3 -0.3
carbon source Guanosine (C) -0.2 N.D. +0.4 -0.3 -0.5
carbon source Citric Acid (C) 10 mM -0.3 N.D. +0.2 -0.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.5 N.D. +0.3 -0.2 -0.0
carbon source pyruvate (C) -0.4 N.D. +0.2 -0.2 +0.0
carbon source Guanosine (C) +0.5 N.D. -0.5 -0.2 -0.0
carbon source methyl-trans-p-coumarate (C) -0.3 N.D. -0.1 +0.4 -0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 N.D. +0.3 +0.2 -0.2
carbon source Guanosine (C) -0.1 N.D. +0.8 -0.7 +0.0
carbon source sn-glycero-3-phosphocholine (C) +0.3 N.D. -0.1 +0.5 -0.2
carbon source L-tyrosine (C) 10 mM -0.0 N.D. +0.6 +0.3 -0.2
carbon source L-Lactate (C) 10 mM +0.3 N.D. +0.5 +0.7 -0.5
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