Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02362 and PFR28_02363 are separated by 55 nucleotidesPFR28_02363 and PFR28_02364 are separated by 114 nucleotidesPFR28_02364 and PFR28_02365 are separated by 188 nucleotidesPFR28_02365 and PFR28_02366 are separated by 235 nucleotides PFR28_02362: PFR28_02362 - Toluene efflux pump outer membrane protein TtgI, at 2,822,549 to 2,823,991 _02362 PFR28_02363: PFR28_02363 - HTH-type transcriptional regulator DmlR, at 2,824,047 to 2,824,970 _02363 PFR28_02364: PFR28_02364 - Aldo-keto reductase YhdN, at 2,825,085 to 2,826,080 _02364 PFR28_02365: PFR28_02365 - hypothetical protein, at 2,826,269 to 2,827,231 _02365 PFR28_02366: PFR28_02366 - HTH-type transcriptional activator RhaS, at 2,827,467 to 2,828,291 _02366
Group Condition PFR28_02362 PFR28_02363 PFR28_02364 PFR28_02365 PFR28_02366
carbon source Guanosine (C) -0.3 -0.2 -0.0 -0.7 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 -0.4 -0.5 -0.2 +0.1
carbon source Cytidine (C) -0.2 +0.0 -0.1 -0.6 -0.3
carbon source L-Malic (C) -0.0 -0.3 -0.2 -0.4 -0.2
carbon source L-tyrosine (C) 10 mM -0.1 -0.3 -0.0 -0.5 -0.1
carbon source L-Valine (C) 10 mM -0.0 -0.3 +0.0 -0.6 -0.2
carbon source L-Lactate (C) 10 mM +0.0 -0.3 -0.2 -0.5 -0.0
carbon source L-Hydroxyproline carbon 10 mM -0.3 +0.1 -0.1 -0.2 -0.5
carbon source butyrate (C) 10 mM -0.1 -0.4 +0.1 -0.1 -0.4
carbon source Xanthosine (C) 10 mM -0.0 -0.4 +0.1 -0.5 -0.1
carbon source Betaine (C) 2.5 mM +0.0 -0.1 -0.1 -0.6 -0.2
carbon source sn-glycero-3-phosphocholine (C) -0.1 -0.2 -0.3 -0.4 +0.1
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.1 -0.1 -0.3 -0.4 +0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.4 -0.1 -0.1 -0.6 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 -0.1 +0.0 -0.6 +0.1
carbon source Vanillic Acid (C) 2.5 mM -0.2 +0.1 -0.3 -0.6 +0.2
carbon source L-Arginine (C) 10 mM +0.1 -0.4 -0.0 -0.4 +0.0
carbon source Betaine (C) +0.1 -0.4 -0.2 +0.1 -0.3
carbon source succinate (C) -0.1 +0.0 +0.2 -0.8 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.2 -0.4 -0.2 +0.6
carbon source L-Lactate (C) 10 mM +0.1 +0.4 -0.2 -0.7 +0.0
carbon source Cytidine (C) -0.2 +0.2 -0.1 -0.5 +0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.3 -0.0 +0.0 -0.3 +0.3
carbon source L-Phenylalanine carbon 5 mM +0.0 +0.1 +0.2 -0.4 -0.2
carbon source methyl-trans-p-coumarate (C) +0.2 +0.3 -0.2 -0.2 -0.3
carbon source Vanillic Acid (C) 2.5 mM -0.4 +0.2 +0.0 -0.3 +0.3
carbon source Vanillic Acid (C) 2.5 mM -0.2 -0.1 +0.0 -0.3 +0.5
carbon source Azelaic carbon 10 mM -0.2 +0.2 -0.0 -0.3 +0.4
carbon source Guanosine (C) -0.1 -0.0 +0.6 -0.2 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.1 -0.2 -0.1 +0.7
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