Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02336 and PFR28_02337 are separated by 28 nucleotidesPFR28_02337 and PFR28_02338 are separated by 74 nucleotidesPFR28_02338 and PFR28_02339 are separated by 22 nucleotidesPFR28_02339 and PFR28_02340 are separated by 22 nucleotides PFR28_02336: PFR28_02336 - Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial, at 2,789,849 to 2,791,564 _02336 PFR28_02337: PFR28_02337 - HTH-type transcriptional regulator GltR, at 2,791,593 to 2,792,447 _02337 PFR28_02338: PFR28_02338 - hypothetical protein, at 2,792,522 to 2,793,457 _02338 PFR28_02339: PFR28_02339 - hypothetical protein, at 2,793,480 to 2,794,013 _02339 PFR28_02340: PFR28_02340 - Periplasmic trehalase, at 2,794,036 to 2,795,661 _02340
Group Condition PFR28_02336 PFR28_02337 PFR28_02338 PFR28_02339 PFR28_02340
carbon source D-Trehalose (C) 5 mM -0.1 -0.5 -0.1 +0.1 -2.3
carbon source D-Trehalose (C) 5 mM -0.1 -0.5 -0.1 +0.1 -2.1
carbon source butyrate (C) 10 mM +0.2 -2.2 +0.4 -0.2 -0.0
carbon source Guanosine (C) -0.0 -2.2 +0.5 +0.1 -0.1
carbon source D-Trehalose (C) 5 mM +0.1 +0.3 +0.1 +0.4 -2.4
carbon source Glycocyamine 10 mM (C) -0.1 -1.0 -0.0 -0.2 -0.1
carbon source L-Glutamic carbon 10 mM -0.2 -0.7 -0.2 -0.2 -0.0
carbon source Glycocyamine 20 mM (C) +0.1 -0.6 +0.2 -0.5 -0.2
carbon source NAG carbon 10 mM -0.0 -0.5 -0.7 +0.1 +0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.0 -0.9 -0.2 +0.2 +0.0
carbon source trans-aconitic (C) 5 mM +0.3 -1.4 +0.3 +0.1 +0.0
carbon source Cytidine carbon 10 mM -0.4 -0.2 -0.6 +0.4 +0.1
carbon source L-Lactate (C) 10 mM +0.2 -0.3 -0.7 +0.1 +0.1
carbon source Betaine (C) +0.3 -1.1 -0.1 +0.5 +0.0
carbon source sn-glycero-3-phosphocholine (C) -0.1 +0.6 -0.6 -0.0 +0.1
carbon source methyl ferulate (C) -0.0 +0.5 -0.4 +0.4 +0.2
carbon source butyrate (C) +0.1 +1.1 -0.0 -0.4 -0.0
carbon source Inosine (C) -0.1 +1.2 -0.2 -0.1 +0.0
carbon source butyrate (C) +0.1 +1.0 -0.6 +0.1 +0.1
carbon source Uridine (C) 10 mM +0.3 -0.1 +0.4 +0.5 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 +0.5 -0.3 +0.5 +0.1
carbon source L-Carnitine (C) 10 mM +0.3 +0.4 +0.0 +0.7 -0.1
carbon source Vanillic Acid (C) 2.5 mM -0.0 +0.7 +0.4 +0.5 -0.0
carbon source Guanosine (C) +0.2 +0.5 +0.1 +0.5 +0.2
carbon source pyruvate (C) +0.0 +1.1 -0.0 +0.3 +0.1
carbon source Guanosine (C) -0.4 +1.1 +0.1 +1.0 -0.0
carbon source 4-Guanidinobutyric (C) +0.2 +1.2 -0.1 +0.5 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 +1.1 +0.6 +0.5 -0.1
carbon source methyl-trans-p-coumarate (C) +0.3 +1.1 +0.2 +0.4 +0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.9 +0.4 +0.9 -0.1
remove
PFR28_02336
plot		 remove
PFR28_02337
plot		 remove
PFR28_02338		 remove
PFR28_02339
plot		 remove
PFR28_02340
plot