Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02312 and PFR28_02313 are separated by 21 nucleotidesPFR28_02313 and PFR28_02314 are separated by 264 nucleotidesPFR28_02314 and PFR28_02315 are separated by 229 nucleotidesPFR28_02315 and PFR28_02316 are separated by 113 nucleotides PFR28_02312: PFR28_02312 - hypothetical protein, at 2,764,300 to 2,765,667 _02312 PFR28_02313: PFR28_02313 - hypothetical protein, at 2,765,689 to 2,766,378 _02313 PFR28_02314: PFR28_02314 - Fumarate and nitrate reduction regulatory protein, at 2,766,643 to 2,767,395 _02314 PFR28_02315: PFR28_02315 - hypothetical protein, at 2,767,625 to 2,768,161 _02315 PFR28_02316: PFR28_02316 - Ribonuclease, at 2,768,275 to 2,769,630 _02316
Group Condition PFR28_02312 PFR28_02313 PFR28_02314 PFR28_02315 PFR28_02316
carbon source L-Lactate (C) 10 mM -0.0 -2.3 -2.4 N.D. +0.0
carbon source Guanosine (C) -0.3 -1.9 -0.7 N.D. -0.3
carbon source succinate (C) -0.0 -0.5 -2.1 N.D. -0.2
carbon source butyrate (C) 10 mM +0.3 -1.1 -1.4 N.D. +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.5 -0.8 N.D. -0.7
carbon source Guanosine (C) -0.1 -1.5 -0.2 N.D. +0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.4 -0.9 -0.3 N.D. -0.3
carbon source sn-glycero-3-phosphocholine (C) -0.1 -0.1 -1.2 N.D. -0.3
carbon source caffeic (C) 2.5 mM -0.2 -0.2 -0.8 N.D. -0.4
stress D-Glucose (C); with Chloride 200 mM +0.1 -0.6 -1.1 N.D. +0.1
carbon source Quinic Acid (C) 10 mM +0.0 -0.5 -0.7 N.D. -0.2
carbon source L-Carnitine (C) -0.1 -0.1 -1.1 N.D. -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 +0.2 -0.8 N.D. -0.7
carbon source Guanosine (C) +0.2 -0.0 -1.3 N.D. -0.2
carbon source L-Hydroxyproline carbon 10 mM -0.1 +0.1 -1.3 N.D. +0.1
carbon source L-Glutamic carbon 10 mM -0.1 -0.4 -0.8 N.D. +0.1
carbon source butyrate (C) -0.4 -0.3 -0.7 N.D. +0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.1 -0.2 -1.0 N.D. +0.1
carbon source Inosine (C) +0.2 +0.2 -1.5 N.D. +0.0
carbon source pyruvate (C) -0.1 +0.2 -1.1 N.D. +0.2
carbon source D,L-Malic Acid (C) 10 mM +0.3 -0.8 -0.2 N.D. -0.0
carbon source Vanillic Acid (C) 2.5 mM -0.3 -0.1 +0.4 N.D. -0.6
carbon source methyl ferulate (C) -0.1 +0.4 -0.7 N.D. +0.0
carbon source D-Glucuronic (C) 10 mM +0.1 +0.4 -0.7 N.D. -0.1
carbon source D-Glucuronic (C) 10 mM -0.2 +0.7 -0.7 N.D. -0.0
carbon source Shikimic Acid (C) 10 mM -0.2 +0.4 -0.7 N.D. +0.3
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.2 +0.3 +0.5 N.D. -0.5
carbon source gluconate (C) 10 mM +0.0 +0.5 -0.7 N.D. +0.3
carbon source Cytidine carbon 10 mM -0.2 -0.3 +0.9 N.D. -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 +0.0 +1.2 N.D. -0.2
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