Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02308 and PFR28_02309 are separated by 95 nucleotidesPFR28_02309 and PFR28_02310 are separated by 18 nucleotidesPFR28_02310 and PFR28_02311 are separated by 134 nucleotidesPFR28_02311 and PFR28_02312 are separated by 168 nucleotides PFR28_02308: PFR28_02308 - hypothetical protein, at 2,758,848 to 2,761,022 _02308 PFR28_02309: PFR28_02309 - 2-pyrone-4,6-dicarbaxylate hydrolase, at 2,761,118 to 2,761,957 _02309 PFR28_02310: PFR28_02310 - Putative niacin/nicotinamide transporter NaiP, at 2,761,976 to 2,763,265 _02310 PFR28_02311: PFR28_02311 - Mannosyl-D-glycerate transport/metabolism system repressor MngR, at 2,763,400 to 2,764,131 _02311 PFR28_02312: PFR28_02312 - hypothetical protein, at 2,764,300 to 2,765,667 _02312
Group Condition PFR28_02308 PFR28_02309 PFR28_02310 PFR28_02311 PFR28_02312
carbon source methyl ferulate (C) -0.0 -0.1 -0.5 -0.7 -0.1
carbon source caffeic (C) -0.1 -0.3 -0.4 -0.4 -0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.1 -0.3 -0.1 -0.4 -0.4
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 -0.0 -0.2 -0.6 -0.2
carbon source caffeic (C) 2.5 mM -0.0 -0.0 -0.2 -0.6 -0.2
carbon source p-Coumaric (C) +0.0 -0.2 -0.3 -0.5 -0.1
carbon source caffeic (C) 2.5 mM -0.0 -0.1 +0.0 -0.6 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 -0.3 +0.3 -1.0 -0.3
carbon source L-Phenylalanine 5 mM (C) +0.1 -0.2 -0.3 -0.7 +0.1
carbon source caffeic (C) 2.5 mM -0.1 -0.4 +0.1 -0.5 -0.1
carbon source methyl-trans-p-coumarate (C) +0.0 -0.4 -0.2 -0.5 +0.1
carbon source Cytidine (C) +0.1 +0.2 -0.2 -0.7 -0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.1 -0.3 +0.1 -0.5 -0.2
carbon source Glycocyamine 10 mM (C) +0.1 -0.6 -0.2 -0.1 -0.1
carbon source methyl-trans-p-coumarate (C) +0.1 -0.4 -0.1 -0.4 -0.1
carbon source butyrate (C) 10 mM -0.0 -0.1 -1.2 +0.1 +0.3
carbon source Guanosine (C) +0.2 -0.6 +0.3 -0.6 -0.1
carbon source p-Coumaric (C) 2.5 mM -0.1 +0.1 +0.1 -0.6 -0.3
carbon source L-Phenylalanine 5 mM (C) +0.0 -0.1 -0.4 -0.5 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 -0.4 +0.1 -0.7 +0.0
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.0 +0.4 -0.2 -0.7 -0.2
carbon source Vanillic Acid (C) 2.5 mM +0.2 +0.1 -0.3 -0.3 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 -0.7 +0.4 -0.4 -0.1
carbon source Guanosine (C) +0.3 -0.3 +0.2 -0.4 -0.3
carbon source trans-aconitic (C) +0.2 -0.7 +0.1 +0.1 -0.1
carbon source methyl ferulate (C) -0.1 +0.4 -0.3 -0.3 -0.1
carbon source p-Coumaric (C) -0.1 +0.4 +0.2 -0.7 -0.1
carbon source Vanillic Acid (C) 2.5 mM +0.2 +0.3 +0.5 -0.7 -0.2
carbon source D-Glucuronic (C) 10 mM +0.1 +0.2 -0.2 +0.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 +0.2 +0.2 -0.4 +0.4
remove
PFR28_02308
plot		 remove
PFR28_02309
plot		 remove
PFR28_02310		 remove
PFR28_02311
plot		 remove
PFR28_02312
plot