Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02302 and PFR28_02303 are separated by 229 nucleotidesPFR28_02303 and PFR28_02304 are separated by 22 nucleotidesPFR28_02304 and PFR28_02305 are separated by 65 nucleotidesPFR28_02305 and PFR28_02306 overlap by 13 nucleotides PFR28_02302: PFR28_02302 - HTH-type transcriptional regulator PgrR, at 2,753,405 to 2,754,328 _02302 PFR28_02303: PFR28_02303 - hypothetical protein, at 2,754,558 to 2,754,902 _02303 PFR28_02304: PFR28_02304 - hypothetical protein, at 2,754,925 to 2,755,953 _02304 PFR28_02305: PFR28_02305 - HTH-type transcriptional regulator PgrR, at 2,756,019 to 2,756,912 _02305 PFR28_02306: PFR28_02306 - hypothetical protein, at 2,756,900 to 2,758,072 _02306
Group Condition PFR28_02302 PFR28_02303 PFR28_02304 PFR28_02305 PFR28_02306
carbon source octanoate (C) 10 mM -0.0 -0.3 -0.1 -0.6 -0.4
carbon source 4-Guanidinobutyric (C) -0.1 -0.1 +0.1 -1.0 -0.1
carbon source L-Glutamic carbon 10 mM -0.1 +0.1 -0.2 -0.9 +0.2
carbon source Betaine (C) -0.1 +0.9 +0.2 -1.4 -0.4
carbon source L-Lysine (C) 10 mM -0.1 -0.8 +0.1 -0.3 +0.3
carbon source Glycerol (C) 20 mM -0.0 -0.6 +0.1 -0.3 +0.2
carbon source trans-aconitic (C) -0.1 +0.4 -0.2 -0.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.0 +0.3 -0.3 -0.8 +0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.0 -0.8 +0.0 +0.4 -0.1
carbon source Glycocyamine 20 mM (C) +0.1 +0.4 -0.4 -0.5 -0.1
carbon source Guanosine (C) -0.2 +0.7 +0.2 -1.0 -0.1
carbon source sn-glycero-3-phosphocholine (C) -0.1 +0.5 +0.1 -0.9 +0.1
carbon source succinate (C) -0.0 +0.5 -0.0 -0.5 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -1.0 +0.3 +0.9 -0.3
carbon source Guanosine (C) +0.1 +0.4 +0.2 -0.7 -0.1
carbon source methyl-trans-p-coumarate (C) +0.1 +0.6 -0.2 -0.4 -0.1
carbon source L-Malic (C) 10 mM +0.2 +0.8 -0.1 -0.5 -0.4
carbon source Cytidine carbon 10 mM -0.2 -0.4 -0.1 +0.8 -0.0
carbon source caffeic (C) 2.5 mM -0.1 -0.4 +0.2 +0.6 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 -0.4 -0.1 +1.3 -0.6
carbon source L-tyrosine (C) 10 mM -0.1 +0.7 -0.2 +0.3 -0.4
carbon source methyl ferulate (C) -0.3 +0.7 -0.2 +0.4 -0.0
carbon source D-Ribose (C) 10 mM -0.1 -0.4 +0.1 +0.8 +0.1
carbon source L-Phenylalanine carbon 5 mM -0.3 +0.7 -0.1 +0.5 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 +0.3 -0.3 +0.5 +0.3
carbon source L-Phenylalanine carbon 5 mM -0.2 +0.4 +0.1 +0.7 +0.1
carbon source methyl-trans-p-coumarate (C) +0.2 +0.7 -0.1 +0.1 +0.3
carbon source D-Mannitol (C) 10 mM -0.0 +0.3 +0.1 +0.9 -0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.0 -0.0 +0.2 +1.1 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 +0.7 +0.3 +0.6 +0.2
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